Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02657 ATGAACGTTGGACGGGTTGGTTCTGCTGGAAACAAGTTCAAAATGTCACTGGGTTTGCCAGTGGCAGCGGTGGTGAGCTGTGCTGATAAAACTGTTTTGCTTGAGCTTATTCTAAACTTGCGATTTTACGCGAGTTTGCTCGAGTTCACACGAGCCTACTCAAAAAAGATCATGCGTGAGAGTTCAGTTCAGAAAATGGACATTAGTAAGAGCCTTAGTCCTGGCAAGGTAATTCAGTGTCGGTTACAATCGTGGCCTTTTTATACAAATGCTGATGATGCAGCCATGGTGAGGCTCTTCTCTTCTGTCTCTTGCCTGTCTACTTCTTCTTCTTCTTCTTGCTACTACGAGGCAATGATGATGTTTTCTGCAATTAGACCAGATATGAGTGAAGAGCTGTGTCCTGGCTAG 411 0.4453 MNVGRVGSAGNKFKMSLGLPVAAVVSCADKTVLLELILNLRFYASLLEFTRAYSKKIMRESSVQKMDISKSLSPGKVIQCRLQSWPFYTNADDAAMVRLFSSVSCLSTSSSSSCYYEAMMMFSAIRPDMSEELCPG 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02657 136 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02657 Vian-Chr3 41264652 41267515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02657 4 85 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 37.647 7.52e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02657 K02894 - egr:104452482 51.9878