Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02643 ATGAAGTTCTTTTCTCGTCTCAAAAACAACAGCACCACCACCAACCACCACCACCATCTCAGATCCTCCTCATGGCCATGGCCATCTTGCCACCAACCCAGAACCCTCTCATTCAGAGCTACCACCGCCACCACAACCACCACCACCACCCCCAACCACGACGTCACCAACTCCATCGCTCAAACTCCGGACTCCTTCTTCACCGACTCACCTAACTCCGACAGCTTCTCCACCGCTTCCGACATATCCCGCACCGTGGACGCCACCGAGACGGTCATTCGCGGCCTTCGCTCCGACCGGCTTTTCTTCGAACCGGACTTTACCAGCTCCTTATGGGAAGCGAAACTCGCCACCCTCCCACCCTTCAAAAACAGCGTGGTTTTCTCCATGGACTCCACTCACCCTTACGTGGATTTCCGCCGCTCCATGGAGGACATGGTGGCCACCCACAGCGTCAGAGACTGGGAGGATCTCGAGGACCTTCTCTGCTGGTTCTTGAAGGTCAATGCACAAAACACTCACCACTACATCCTCCGTGCTTTCGTCGATTTCTTGTTCTCTCTCGCACTTGCTTCTTCTTCTTCTTCTTCTTCCAACGCCATTTGTAGTACCACCACCACTCTCTCTTCTCTCTCTTCTTCCTCCTCCTCTTGCACCACTCGCTGCACTTACTGTTTCGAGGAAGAGCTTCAACACCAACACATTTCTTAA 711 0.5373 MKFFSRLKNNSTTTNHHHHLRSSSWPWPSCHQPRTLSFRATTATTTTTTTPNHDVTNSIAQTPDSFFTDSPNSDSFSTASDISRTVDATETVIRGLRSDRLFFEPDFTSSLWEAKLATLPPFKNSVVFSMDSTHPYVDFRRSMEDMVATHSVRDWEDLEDLLCWFLKVNAQNTHHYILRAFVDFLFSLALASSSSSSSNAICSTTTTLSSLSSSSSSCTTRCTYCFEEELQHQHIS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02643 236 NCBIfam uncharacterized plant-specific domain TIGR01568 126 189 IPR006458 -
Vian3g02643 236 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 37 190 IPR038933 GO:0045892
Vian3g02643 236 ProSiteProfiles OVATE domain profile. 128 187 IPR006458 -
Vian3g02643 236 MobiDBLite consensus disorder prediction 45 64 - -
Vian3g02643 236 MobiDBLite consensus disorder prediction 1 27 - -
Vian3g02643 236 Pfam Transcriptional repressor, ovate 132 188 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02643 Vian-Chr3 41028401 41029111 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian3g02643 Ovate 1.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02643 - - vra:106771683 362.844