Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02631 ATGTCGCAACTAAACGGAGCTTACTACGGTCCTTCCATTCCGCCGCCGAAGTCCTACCGCCGTCCGTCCAGCGGCGGAGGTGGGTGCGGGTGCCTGAGCTGCTGCTGTGGGTGCATCTTCAACTGCATCATCAGCCTCATCTGCAAGATCCTCACCACCGTGCTCATCATCGCCGCCGTGCTCGTGTTCCTCTTCTGGCTCATTGTGCGCCCCAACGTCCTCAAATTCCACGTCAGCGATGCCTCTCTCACGCGCTTCACGTTCTCCAACAACACGCTCCACTACAACCTCGCCCTCAACGTCTCCATCCGCAACCCCAACCGCAGAGTCGGCGTCTACTACGACCAAATCGAAGCGCTCGCTTTATACGACGATGTTCGATTCGCCTCCCAGTCCCTGGGGCCCTTCTTCCAGCACACCAAAAACACCACCTTCATCAACCCCCTTTTTAATGGCCAGCGCGTGACGCCACTCACGGCTGAGCAGGGTTCCCATTTCGAAAAGGAGAACGGCGCCGGGATTTTCTCCATCGACTTGAACCTCTTCATGAATGTTCGGTTCAAGTTCTTGTTCTTCAAAAGCCACACCGTCAGACCCAAGATTCGGTGTGGGTTGCACGTGCCGCTGAAATCGCGTAACACAACTACCTCTCCTGACGCTGCGTTTCAGGCCACGGACTGCGATTGGATTTACAAACGATGGTGGATCCGTTGA 714 0.5616 MSQLNGAYYGPSIPPPKSYRRPSSGGGGCGCLSCCCGCIFNCIISLICKILTTVLIIAAVLVFLFWLIVRPNVLKFHVSDASLTRFTFSNNTLHYNLALNVSIRNPNRRVGVYYDQIEALALYDDVRFASQSLGPFFQHTKNTTFINPLFNGQRVTPLTAEQGSHFEKENGAGIFSIDLNLFMNVRFKFLFFKSHTVRPKIRCGLHVPLKSRNTTTSPDAAFQATDCDWIYKRWWIR 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02631 237 PANTHER OS05G0367900 PROTEIN 45 213 IPR044839 GO:0098542
Vian3g02631 237 Pfam Late embryogenesis abundant protein 100 203 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02631 Vian-Chr3 40838388 40839101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02631 68 215 SNARE and Associated Proteins AT1G32270 37.748 1.53e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02631 - - pvu:PHAVU_007G268900g 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02548 2 46149321 46150001 Vian3g02631 3 40838388 40839101 PCT