Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02629 ATGGCTGATACACAGCCGCCGCCGAACACCGCCGCAGCAAACGTCGCCGCTTCCGTTCCTTCAAAGGAGCATTTCCGCACAAGATGCTGCTACTGTCTCTGCAAAACCTTGTGGATCTTTCTGGTCCTCGTTATCGTCCTCGTCATGCTCGTGATTTTGGTTTTATACATCATCATCACACCCCGCTCCTTCAGATTCCACGTCACTGACACTACCCTCACACAATTCGATTACGCTGCCAACTCCACCCTTCGCTACAACCTCGTACTCAACATCACAGCAAGCAACCCTAACAAGAAGCTCAAGATCTACTACGACGTCGTTCAGGCCAACGCGTTCTACGGCGGCGTTAGGTTTTCCACCACCGACATCAACATGCCTTGGAATTCCTACCTTCAGGACAAGAAGGGCACTAACCTTTTCAGCGCGGTTTTCTCGGGACAACGTGTGATGGTGTTGGATAGGGACGAGGTTTCTGAGTTTGATGAAGATAACAAGAATGGGGTGTTTCCTATAGATGTTATGATTCGTTTCACCATTAGGTTCAGGCTAGAAGCTTTTCAGTTTGGGTATTACTATCCTAGAGGCATGTGTGAACTCAAAGTTCCTTTGACTTCTAAGGGGGAAAAGGTGGTTCCGTTTAAGGTCACCAAGTGTCGAATTGATTTCTGA 672 0.4821 MADTQPPPNTAAANVAASVPSKEHFRTRCCYCLCKTLWIFLVLVIVLVMLVILVLYIIITPRSFRFHVTDTTLTQFDYAANSTLRYNLVLNITASNPNKKLKIYYDVVQANAFYGGVRFSTTDINMPWNSYLQDKKGTNLFSAVFSGQRVMVLDRDEVSEFDEDNKNGVFPIDVMIRFTIRFRLEAFQFGYYYPRGMCELKVPLTSKGEKVVPFKVTKCRIDF 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02629 223 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02629 Vian-Chr3 40806200 40806871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02629 58 205 SNARE and Associated Proteins AT1G32270 32.000 1.78e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02629 - - gmx:100787531 276.174