Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02582 ATGAGAGGGAAAGTAATGAAAGATGAAGATGACGTTGACTCCTCCATCACCCTCCGCCCGGGGGACTTCTGCGGCGAGGAGTTGCTCACCTGGGCCCTCATGTCCTCCTCCAACCTCAACCTCCCTTCCTCCACGCGCACCGTGAAGTCTATCTTGGAAGTGGAGGCTTTCGCGCTCCGCGCTGAGGACCTAAAGTTCGGCATGGGGGCCCACTTCATCCAAGCGGCGTGGTGGCGGCACCGCAAGAGGAAGCTGGCGATGGAGCTGTTGGGTAAGGAGAGCCTGTACTACACGAATTTGGTGGAGATAGTAGAGGAGGATGATGTTGATGGTGATGCAAGTGATGATGGAGGTGGTGCAGGTGAGAGTTCGAGTGGTCCCAGCGTGGATTTTCAGAATCTTGGGGCTACCATTTTGGCTTCTAAGTTCGCTGCGAACACCAGAAAAGGAAAGATTAAGACGGTGATAATTAATCTTCCTAATTCTGATAGTTTGAAGATGCCCAAGATGTTCAAGCCTACAAACACTGTGATTCATAATAAAATATGA 549 0.5118 MRGKVMKDEDDVDSSITLRPGDFCGEELLTWALMSSSNLNLPSSTRTVKSILEVEAFALRAEDLKFGMGAHFIQAAWWRHRKRKLAMELLGKESLYYTNLVEIVEEDDVDGDASDDGGGAGESSSGPSVDFQNLGATILASKFAANTRKGKIKTVIINLPNSDSLKMPKMFKPTNTVIHNKI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02582 182 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 166 - -
Vian3g02582 182 Gene3D Jelly Rolls 1 70 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02582 Vian-Chr3 40153998 40155399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02582 14 173 Ion Channels AT5G14870 48.205 4.13e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02582 K05391 - gmx:100785326 188.348