Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02578 ATGGCTTTTCCTCCACACATAGTAGAAGACTGCATGGGCCTCCTCAAACTCTTCAGTGATGGCACCGTTTTTCGTTCCAATATTCAGTTCCAAGAACAACCCTCATCTACCCAACAACACAACAACCTCGTACTCTTCAAAGATTACATCTTTCACAAGAAATTTAACCTCCACCTCCGTCTCTACAAACCTAAACTCGATAACGACGATAATGGTGCTGAGAGCAAGGAGAAACTACCGGTGCTAATGTTCCTACATGGTGGGGGCTTCTGCTTCGGGTCGCACGCGTGGCCGCACATTCATGCATGTTGTGTACGTCTCGCCGTGGATCTCCGTGCGGTTGTGGTGGCGCCGGACTATCGTCTGGCACCGGAGCACCGCCTTCCCGCAGCGGTGGACGATTGCGTGGAGACTTTGCGGTGGCTGCAGAGGCAGGGACATGGCGGGGACTCGTGGGTGAGCGGCGTTGACTTTGAGCGCGTGTTTGTGTTTGGCGACTCGTCTGGCGGGAACATTGCGCACCACTTGGCGGTTCAGCTCGGATCCGGTTCGAGAGAGATGGACCCGGTTCGAGTACGAGGTTACGTGATGATGGGCCCATTTTTCGGTGGGGTGGTTCGGACCAAGTCTGAGGTGGGCCCTCCGGAAGAAATGCTGACACTTGATTTGCTGGACAGATTTTGGAGATTGTCTATACCTATTGGAGAGAATAGAGATCATCCATTGGCAAACCCCTTTGGCCCTAATAGTCAGAATCTTGCAGATGTGAAGCTTGATCCTATCTTAGTGATAGTTGGTGGCAATGAATTGTTGAAGGACAGAGCAAAAGACTATGCAACAAGGTTAAAGGAACTAGGGAAGAACATTGAATACATTGAGTTCAAGGACAAGGAACATGGATTTCTCACTCATGATTCATCCTCACAAGTTGTCCAAGACCTTCTGCAAATCATCAAACACTTCATGCTTCAAAATTCTAGTTAG 984 0.497 MAFPPHIVEDCMGLLKLFSDGTVFRSNIQFQEQPSSTQQHNNLVLFKDYIFHKKFNLHLRLYKPKLDNDDNGAESKEKLPVLMFLHGGGFCFGSHAWPHIHACCVRLAVDLRAVVVAPDYRLAPEHRLPAAVDDCVETLRWLQRQGHGGDSWVSGVDFERVFVFGDSSGGNIAHHLAVQLGSGSREMDPVRVRGYVMMGPFFGGVVRTKSEVGPPEEMLTLDLLDRFWRLSIPIGENRDHPLANPFGPNSQNLADVKLDPILVIVGGNELLKDRAKDYATRLKELGKNIEYIEFKDKEHGFLTHDSSSQVVQDLLQIIKHFMLQNSS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02578 327 Coils Coil 268 288 - -
Vian3g02578 327 Gene3D alpha/beta hydrolase 14 326 IPR029058 -
Vian3g02578 327 SUPERFAMILY alpha/beta-Hydrolases 5 321 IPR029058 -
Vian3g02578 327 Pfam alpha/beta hydrolase fold 82 302 IPR013094 GO:0016787
Vian3g02578 327 PANTHER ARYLACETAMIDE DEACETYLASE 15 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02578 Vian-Chr3 40094678 40097449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02578 7 322 Carbohydrate Esterase AT5G16080 35.758 1.84e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02578 - - gmx:100801473 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02578 3 40094678 40097449 Vian3g02578 3 40094678 40097449 ECH
Vian2g02959 2 50276353 50278799 Vian3g02578 3 40094678 40097449 PCT