Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02540 ATGTGGAAGCAAGTTTTGGAGTCACGCCTTCCTTTTATGTTAACATTCAAATTCAATGGAATTGCCACTGCATCTTTCACTGTATATCAAAATAAAGGGCAATTGAGTGCAACCTTCTATTCCACCACATGCTCCAATGTCTCAACCATTGTGAGGAATTCTGTGCAGCAGGCTTTGACATCTGATTCACGTATTGCTGCAAGCCTCACTCGTCTCCACTTTCATGATTGCTTTGTCGATGGCTGTGACGGGTCCATTTTGCTCGATGTTGGTGGTAACATCACACAAAGTGAGAAAACTGCAGCTCCCAACGCCAATTCCGTTCGGGGATTTGATGTGGTTGACAGCATCAAGAGTTCCCTCGAAAGTTCATGCCCTGGTGTTGTATCTTGTGCTGATATTCTTGCCCTTGCTGCAGAATCCTCTGTGTCCCTGTCTGGAGGTCCTTCATGGACTGTATTACTTGGAAGAAGAGACAGTTTAACTGCAAACCAAGCTGGTGCCAACACTTCCATTCCGTCTCCATTTGAGAGCCTAGCCAACATCACATCCAAATTTTCTGCTGTTGGCTTAGACACAACAGATCTTGTTGCACTATCTGGTGCGCACACTTTTGGACGTGCACAATGCCAGTTTTTCTCCCAAAGGTTATTCAACTTCAGTGGCACAGGAAGTCCTGATCCAACCCTGAACTCAACCTATTTGGCCACTCTACAGCAAAACTGTCCCCAAAATGGGAGTGGGTCTACATTGAACAACCTTGATCCTTCAACCCCTGACACTTTTGACAACAACTATTTCACCAATCTTCTCATCAACATGGGTCTTCTCCAAACAGACCAAGAGCTCTTCTCCACCAATGGCTCTTCCACAATCTCCATTGTTAACAACTTTGCCAACAACCAATCGGCTTTCTTCGAAACTTTTGCTCAATCAATGATCAACATGGGTAACATCAGTCCTTTGACAGGTACTCAAGGCGAAATCAGAACTGATTGCAAGAAAGTCAATGGAAGTTGA 1020 0.4461 MWKQVLESRLPFMLTFKFNGIATASFTVYQNKGQLSATFYSTTCSNVSTIVRNSVQQALTSDSRIAASLTRLHFHDCFVDGCDGSILLDVGGNITQSEKTAAPNANSVRGFDVVDSIKSSLESSCPGVVSCADILALAAESSVSLSGGPSWTVLLGRRDSLTANQAGANTSIPSPFESLANITSKFSAVGLDTTDLVALSGAHTFGRAQCQFFSQRLFNFSGTGSPDPTLNSTYLATLQQNCPQNGSGSTLNNLDPSTPDTFDNNYFTNLLINMGLLQTDQELFSTNGSSTISIVNNFANNQSAFFETFAQSMINMGNISPLTGTQGEIRTDCKKVNGS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02540 339 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Vian3g02540 339 FunFam Peroxidase 173 316 - -
Vian3g02540 339 Gene3D Peroxidase, domain 2 173 316 - -
Vian3g02540 339 Pfam Peroxidase 51 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 Gene3D - 39 337 - -
Vian3g02540 339 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 PANTHER PEROXIDASE 72-RELATED 34 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 ProSiteProfiles Plant heme peroxidase family profile. 34 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g02540 339 CDD secretory_peroxidase 34 336 IPR033905 GO:0004601|GO:0042744
Vian3g02540 339 FunFam Peroxidase 38 185 - -
Vian3g02540 339 SUPERFAMILY Heme-dependent peroxidases 34 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02540 Vian-Chr3 39539021 39542588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02540 34 339 Peroxidase AT5G06720 76.797 1.09e-170 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02540 K00430 - gmx:100782549 565.074