Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02499 ATGGTTCAGAACGATCACATCAGCAAGGAGAGAGACCTTGAGTTTCTGCTCGACGAGAACGACGACGATGCAGAACAGCAGCAGGACATTGAAGCTGACAAGTACCAAAGTAGCAGTGAAGAAGACAGTGATGTCGAGCCTCGCTCTTTCTCTTCTCACCAATGGCCTCAGAGTTACAAAGAGACTACGGATTCTTACACAATAGCTGCTGCTCCAAATCTGGAGTCAGTTCTGCGAGGGCCGAGTTTTATATATTCTAGTTTTGACAATCGTTCAAAGAGTAGCTTAGACATTGATGGAAAGACACCTTTTCTATCTTCTGAAGGCACTAATCAATCAACTTGGTGGGAGAAAGCCTCAGTACAACGCCATTTCACTGGAGAATTACCCATTGGATATGGATGCAGCTTCACTCAGACAGTTTTCAATAGCGTTAATGTGATGGCTGGAGTTGGCCTTCTATCTACACCATACACAGTGAACCAAGCTGGGTGGATCGGCATTGCAGTGATGCTCTTTTTTGCAGTTATTTGCTGTTATACAGCAACTCTTATGAGACACTGCTTTGAAAGCAGAGAAGGAATCACTACCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTGTTGTATCGATCATTTTGTACATTGAATTATATTCATATTGTGTGGAGTTCATCACCTTGGAAGGAGACAACCTCAGTAGTCTGTTTCCTGGTACTTCCTTAAATCTGGGTATTTTCCAGTTAGACACTATGCATCTCTTTGGAGTTCTGACAGCACTTATTATTCTCCCAACTGTTTGGTTGAAGGATCTTCGCCTAATTTCTTATCTATCAGCTGGAGGAGTTGTTGCAACACTTTTGATTATTATCTGTGTGCTTTTTGTTGGGACCACAGAAGGTGTTGGATTCCATCACACTGGTCAATTGGTAAAGTGGAATGGCATTCCATTTGCTATTGGTGTCTATGGATTTTGCTTTGCAGGACATTCGGTTTTCCCAAACATTTATCAGTCCATGGCTGACAAGACACAGTTTACCAAAGCCCTCATAACATGTTTTTCTTTGTGTGTTTTGATATACGGAAGCGTTGCAATCATGGGATTTCTCATGTTTGGTGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCAGGTGCTGTTGCTTCCAAAATTGCATTGTGGACAACGGTTATTAACCCATTCACTAAATATGCTCTGTTGCTGAACCCACTGGCAAGGAGTTTAGAGGAGTTGCTGCCAGAGAGAATCTCAACCACATATTGGTGTTTCATTCTTCTTAGAACAGCCCTTGTTGCATCTACAGTTTGTGTTGCTTTTCTGGTTCCCTTTTTTGGACTTGTGATGGCTTTAATTGGTTCTCTCTTCAGTTTACTTGTGTCAGCCATAATGCCAACTTTATGTTTCCTGAAAATTATTGGGAAAAAAGCTACAAAGTCACAGGTTGCACTCAGTGTTGCAATTGCTGTACTTGGAATGATTTGTGCAGTCCTTGGAACATACTCCTCTGTGTTGAGTATTGCAGACAGTTACTGA 1572 0.4186 MVQNDHISKERDLEFLLDENDDDAEQQQDIEADKYQSSSEEDSDVEPRSFSSHQWPQSYKETTDSYTIAAAPNLESVLRGPSFIYSSFDNRSKSSLDIDGKTPFLSSEGTNQSTWWEKASVQRHFTGELPIGYGCSFTQTVFNSVNVMAGVGLLSTPYTVNQAGWIGIAVMLFFAVICCYTATLMRHCFESREGITTYPDIGEAAFGRYGRIVVSIILYIELYSYCVEFITLEGDNLSSLFPGTSLNLGIFQLDTMHLFGVLTALIILPTVWLKDLRLISYLSAGGVVATLLIIICVLFVGTTEGVGFHHTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKTQFTKALITCFSLCVLIYGSVAIMGFLMFGDGTLSQITLNMPPGAVASKIALWTTVINPFTKYALLLNPLARSLEELLPERISTTYWCFILLRTALVASTVCVAFLVPFFGLVMALIGSLFSLLVSAIMPTLCFLKIIGKKATKSQVALSVAIAVLGMICAVLGTYSSVLSIADSY 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02499 523 MobiDBLite consensus disorder prediction 1 15 - -
Vian3g02499 523 Gene3D Amino acid/polyamine transporter I 134 521 - -
Vian3g02499 523 MobiDBLite consensus disorder prediction 1 57 - -
Vian3g02499 523 FunFam Amino acid transporter AVT1A 133 522 - -
Vian3g02499 523 Pfam Transmembrane amino acid transporter protein 136 516 IPR013057 -
Vian3g02499 523 MobiDBLite consensus disorder prediction 34 48 - -
Vian3g02499 523 PANTHER OS05G0424000 PROTEIN-RELATED 139 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02499 Vian-Chr3 38893955 38897932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02499 17 458 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.795 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02499 K15015 - gmx:100790344 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02499 3 38893955 38897932 Vian3g02499 3 38893955 38897932 ECH