Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02494 ATGGGAAAGAAGAGAAGTAGGGTTTTGGAGGATGATGAGGAATTCGAAACCCACTCTTCTGATCAGAACGAACACGCCCTCTACCAGGTTCTTGGTGTGGAGAGAACAGCATCTCAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTAAAGCTACATCCTGATAAGAATCCCGGTGATGAGGAAGCTAAAGCTAAGTTTCAGCAATTGCAACATGTTATCTCAATTCTTGGTGATGAAGAAAAGCGGGCTGTATATGATCAGACTGGTTGTATTGATGACGCTGAGCTTGCAGGGGATGTTGTTCAGAATCTCAAAGAATATTTCAGAGCAATGTACAAGAAGGTCACTGAAACCGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAGAAATGATTTGATTGACCTCTACAAGAAGTACAAGGGTAAAATGAATAGGTTATTCCATTCAATGCTTTGTTCAGATCCTAAACTTGATTCACACCGATTCAAGGATATTCTTGATGAGACTATAGCTGCTGGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGGCAAAGAAATTATCAGAAACCAAGCCACCTACTAGTCCCATAAGAAGGCGTGCAAAATCATCAAAGAAACAATCAGAAACAGATCTGGGTGCCATCATATCACAGCGTCAACATGAGAGGAAAGACCGCCTTAATTCTATGTTCTCATCTCTAATTTCAAAGTATGGTGGGGATCAAATGCCAGAGCCCTCTGAAGAGGAATTTGAAGCTGCACAGAGAAAACTGGAAAAACGTAGGTCCTCAAAAAAGTCAAAGCAAAGATAA 837 0.4062 MGKKRSRVLEDDEEFETHSSDQNEHALYQVLGVERTASQQEIKKAYYKLALKLHPDKNPGDEEAKAKFQQLQHVISILGDEEKRAVYDQTGCIDDAELAGDVVQNLKEYFRAMYKKVTETDIEEFEANYRGSDSERNDLIDLYKKYKGKMNRLFHSMLCSDPKLDSHRFKDILDETIAAGELKETKAYKKWAKKLSETKPPTSPIRRRAKSSKKQSETDLGAIISQRQHERKDRLNSMFSSLISKYGGDQMPEPSEEEFEAAQRKLEKRRSSKKSKQR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02494 278 MobiDBLite consensus disorder prediction 1 21 - -
Vian3g02494 278 MobiDBLite consensus disorder prediction 193 215 - -
Vian3g02494 278 Pfam DnaJ domain 27 88 IPR001623 -
Vian3g02494 278 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Vian3g02494 278 SUPERFAMILY Chaperone J-domain 25 97 IPR036869 -
Vian3g02494 278 CDD DnaJ 28 80 IPR001623 -
Vian3g02494 278 PRINTS DnaJ domain signature 63 83 IPR001623 -
Vian3g02494 278 PRINTS DnaJ domain signature 28 46 IPR001623 -
Vian3g02494 278 PRINTS DnaJ domain signature 46 61 IPR001623 -
Vian3g02494 278 PRINTS DnaJ domain signature 83 102 IPR001623 -
Vian3g02494 278 SMART dnaj_3 25 83 IPR001623 -
Vian3g02494 278 Gene3D DnaJ domain 11 119 IPR036869 -
Vian3g02494 278 MobiDBLite consensus disorder prediction 193 278 - -
Vian3g02494 278 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 14 277 IPR042977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02494 Vian-Chr3 38844802 38847103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02494 28 88 C2H2 Transcription Factor Family AT1G74250 42.424 1.11e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02494 K09529 - gmx:100781463 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02494 3 38844802 38847103 Vian3g02494 3 38844802 38847103 ECH
Vian2g01973 2 39290408 39292356 Vian3g02494 3 38844802 38847103 PCT