Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02483 ATGGCCGAATCACTCATTGTTGCAGTTGCAGAATCACTTATAACGAAGTTCGCTTCTCGAGCTGTCGAACAAGCTTCTTTGGCGTTGGGTGTGTACCAAGAGCTACAGCAGATGAAAAAGACCATGGCACTGGTCAAAGCATTCCTGTTAGACGCTGAGCAAAAGAAGCAGCAGAACAATGCCCTGAGTGAGTGGCTAAGACAGATCAGGCAGGTATTCGCCCACGCGGAAGACATAGTCGACAACTTTGAATGCGAAGTATTGCGGAAGCACGTTGTCAGCTCGCACGGCAGCTTCTGCAGGAAGGTATGTCGTTTGTTTTCAACTAGTAATCCTGTGGTTTACCGTTACAGAATGGGGCGTGAGATAAAAGACATCAAGAAGCAGTTAGAGAAGGTTGCAACTGATGGCCACATGTTTGGTCTTCAAAGCAGTGACAAGGATACCAAGGTTTTGAATGCGAGGGAAATGACTCATTCACATGTGAATGTCTCAAATGTGGTAGGAAGAGAACATGATAAGCAGAAGATAATAGAGCTTTTGCTGCAAGATGATCATCATGACAGAAGTCTCTCAGTGATTTCCATTGTGGGATTTGGAGGCTTGGGAAAGACCACTCTTGCAAAGGTAGTGTTCAATGACACTAGCATTGAGGAATGTTTCACTTTGAAGATGTGGGTGTGTGTCTCTAATGATTTCGAACTTAGGAATGTCCTTATTAAAATCCTAAACTCTGCTCCTAACGCCACCAATGAGAAGTTCAAAAATTTAGACACGGATCAACTTCAAATTCGTTTGAGAAGTAGCCTTCAACGTGAGAAGTTCTTGCTCGTCTTAGACGATGTGTGGAACGAGAATCGTGTTAAATGGGATGAGTTGAAGGAAATTATAGAGACGGTAGGTAACAAAGGAAGTAAAATCTTGGTGACTACTCGTAGTCACTCAATAGATGCCATGATGCGCACTAAATTCTCTAACTCTTACATTCTAAAAGGCCTTTCTGAGGAGGATTCCATGTCTCTGTTTGTCAAATCTGCTTTTGATGATGGAGAAGGGAAAAACCATCCAGAGTTAATGGAGATTGGGAGACAAATTGTGAGAAAATGTGGAGGAATACCATTGGCGGTGAGAACCTTAGGAAGCTCACTGTTCTCAAGGGTGGATCGAAAAGAGTGGGAGAATATAAGAGACAATGAAATTTGGAACTTAAAACAAAATGAAAATGATATTTTGCCTGCTCTTGAGTTAAGTTATGATCAACTACCTTCGCATTTGAAACGATGTTTTGCTTGCTTTTCTCTTGCCTCGAAGGACTTTGATGTTTCTAGTTCTTACGTTGCTCTGCTGTGGGAGGCACTTGGTTTTCTTTCCCCACCAAAGCAAAATGAAACAACACATGATGTTGCTAATGAATATTTGCGTGAGCTATGGTCAAGATCTTTTCTCACAGATTTTCTAGACATGGGGAGCACATGCAGATTTAAATTACATGATTTAGTCCGTGATCTTGCAGTGTACGTAGCCAAAGGTGAGTTTCAAATATTGTATCCCCACAGTACAAGTATATCTGAGCATGCCCAACACTTGTCATTCATTGAAAATGATATGCTTGGCCAAGATCTCGTTCCCATAGGTGCAAGAACTATAATTTTTCCCATGGAAGCTACTAATGATGCTTTCTTGAATACGTTGGTATCCAGGTGCAAATACCTCAGAGTTCTAGACTTGAGTTATTCTGAATACGAGAGTTTGCCTAGCTGCATTGGAAAGTTGAAACATTTAAGATATCTCAATCTTTCAGGTAATAAAAAACTTAAGGGACTCCCAGATTCCTTATGCAAACTCCAAAATTTACAAACTTTGGACCTAAGAGGTTGTATAAAGCTGCAAAATCTGCCCAAAGGAATAAGAAAGTTAGTCAGCCTTCGTCGGCTGCTTGTAACCACTAGGCAACCAGATTTTCCAGACAAAGAGATTTCAAAATTGGCTTCTATAGAAACAGTAGAACTCTATTCTTGTGATAATTTGGAGTCATTGTTCCAAGCTATACAACCTAGAAGTCTTAAGTTTTTGCATCTTTCTGGTTGTGGGGGTTTAAAGTCTCTGTCCTTTCATGTCATTACAAATTTAGAGAGTTTGGTTATCTTCAAATGCAGTAAGATGGAATTGTCAATGGGCCTTAGCAACCTTAATTCCATTCCTGATTCAAGGTTAAAATTACTTGTTCTTCAAAGTTTGCCACAGTTGGTCACTTTGCCTGAGTGGTTGCAAGGATCTGTGAACACACTGCATTCCTTGTTACTTGTTGACTGCAACAATCTTGAGGAGCTTCCTGAGTGGATGTCAACTTTGACCTCTCTCAAACTACTTATAATTGAACATTGTCCAAGGCTAATCTCACTCCCTGATAGCACGCATCACCTCCGAAACCTTGAACATTTGGAAATCAATGATTGTCCTGAATTATGCAAAAGATGTCAGCCAGGAGTTGGACTGGATTGGCACAAAATATCCCACATCAAAGAAGTTATCATTGGTGAACCAGAAGAGTAG 2553 0.4074 MAESLIVAVAESLITKFASRAVEQASLALGVYQELQQMKKTMALVKAFLLDAEQKKQQNNALSEWLRQIRQVFAHAEDIVDNFECEVLRKHVVSSHGSFCRKVCRLFSTSNPVVYRYRMGREIKDIKKQLEKVATDGHMFGLQSSDKDTKVLNAREMTHSHVNVSNVVGREHDKQKIIELLLQDDHHDRSLSVISIVGFGGLGKTTLAKVVFNDTSIEECFTLKMWVCVSNDFELRNVLIKILNSAPNATNEKFKNLDTDQLQIRLRSSLQREKFLLVLDDVWNENRVKWDELKEIIETVGNKGSKILVTTRSHSIDAMMRTKFSNSYILKGLSEEDSMSLFVKSAFDDGEGKNHPELMEIGRQIVRKCGGIPLAVRTLGSSLFSRVDRKEWENIRDNEIWNLKQNENDILPALELSYDQLPSHLKRCFACFSLASKDFDVSSSYVALLWEALGFLSPPKQNETTHDVANEYLRELWSRSFLTDFLDMGSTCRFKLHDLVRDLAVYVAKGEFQILYPHSTSISEHAQHLSFIENDMLGQDLVPIGARTIIFPMEATNDAFLNTLVSRCKYLRVLDLSYSEYESLPSCIGKLKHLRYLNLSGNKKLKGLPDSLCKLQNLQTLDLRGCIKLQNLPKGIRKLVSLRRLLVTTRQPDFPDKEISKLASIETVELYSCDNLESLFQAIQPRSLKFLHLSGCGGLKSLSFHVITNLESLVIFKCSKMELSMGLSNLNSIPDSRLKLLVLQSLPQLVTLPEWLQGSVNTLHSLLLVDCNNLEELPEWMSTLTSLKLLIIEHCPRLISLPDSTHHLRNLEHLEINDCPELCKRCQPGVGLDWHKISHIKEVIIGEPEE 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02483 850 Gene3D - 10 123 - -
Vian3g02483 850 Pfam NB-ARC domain 171 419 IPR002182 GO:0043531
Vian3g02483 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 431 IPR027417 -
Vian3g02483 850 PRINTS Disease resistance protein signature 193 208 - -
Vian3g02483 850 PRINTS Disease resistance protein signature 369 383 - -
Vian3g02483 850 PRINTS Disease resistance protein signature 613 629 - -
Vian3g02483 850 PRINTS Disease resistance protein signature 269 283 - -
Vian3g02483 850 Gene3D - 423 505 IPR036388 -
Vian3g02483 850 SUPERFAMILY L domain-like 495 840 - -
Vian3g02483 850 Gene3D - 332 422 IPR042197 -
Vian3g02483 850 PANTHER DISEASE RESISTANCE PROTEIN RP 38 749 IPR044974 GO:0006952
Vian3g02483 850 FunFam Probable disease resistance protein At1g61300 149 324 - -
Vian3g02483 850 CDD RX-CC_like 8 134 IPR038005 -
Vian3g02483 850 Pfam Rx N-terminal domain 11 97 IPR041118 -
Vian3g02483 850 Gene3D - 148 325 IPR027417 -
Vian3g02483 850 Gene3D Ribonuclease Inhibitor 684 828 IPR032675 -
Vian3g02483 850 Gene3D Ribonuclease Inhibitor 516 683 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02483 Vian-Chr3 38639082 38641634 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02483 176 798 WRKY Transcription Factor Family AT5G45050 24.103 4.02e-13 71.6