Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02481 ATGGCCGAATCACTTCTTTTCAGCTTCGCAGAATCGCTCATAGGAAAGCTTGCCACTGCTGCCGTTCAAGAAGCTTCTTTGGCGCTTGGTGTACATAGCGAGCTAAAGCAGATGAAAGCGACTATGGCACTCATCAAAGGTGTTCTGTTAGATGCTGAGAAAAAGAATCCGCAGAGTAGTGCCCTGAACGAATGGCTGACTCAGATCAAGCGCGTGTTTTCTGATGCTGAAGACATAGTCGATGATTTTGAGTGTGAAGCCTTGCGGAAACACGTTGTCAACACCTATGGTAGCTGCTCAAGAAAGGTACGCCGTTTCTTCTCATCAAGTAATCCTGTTGTTTATGGTCTTAGAATGGCGCATCACATTCAAGACATCAACACCAGGTTGACCAAACTTTCAACACAACTAAGCATGTTTGGCCTTCAAATCATTGACCATGATACACGTGTTGTGCACGTGAGGGAAATGACTCATTCTCATGTAAACCCTTCCCATGTTACAGGGAGGGAACATGATAAGAATGAAATAGTAAACCTTCTTATGCAAGATGCACTTGGTTTTCTTCCGCCCCCAAAGGAAAGTGAATCAATGGTGGATGTTGCCAATCATCTTGTGTATGAGCTATGGTCAAGATCTTTTCTTTCAGATTATTTTGACTTGGGGGCCGATTCCACATTTACGTTACATGATTTGATGTATGATCTTGTAGTTCATATTGCCAAAGGTGAGTTTGAAAGAATAAATCTCCGCAATCAAAAATTTCCTGAGAATGCCCAACATTTAGTCTTTATGGAAAATAATTTGCATGGTCAAGCTTTTCCTCACACAGGTTTAAAAAGTGTGTACCTTTCCCAGGGAATGAACAATGAAGCTTTCTTGATTAAATTGGTGTCAAGATGCAAATACTTGAGGATTTTAGGATTATATTCATCTGAAATCGAGAGTTTGCCTTACTCTATTGGAAAGTTGAAACATTTAAGACATCTTAATCTCCAGTTTAGTAAAAAACTCAGGAGACTCCCTGATTCAGTCTGCAAACTTCAAAATTTGCAAACTTTGGATCTCTTAGGATGTGTAGAGCTACAAAAACTACCCAAAGGAATGAGAAATCTAATCAGCCTTCGGAATCTTTATATAACCACCAAACAAGTTGATTTTTCAGAGAAAGACATTGCAGTTTTGACTACTTTAGAAAATTTAAATATTAGTTATTGTGATAATTTGGAGTCATTGTTCAATGGTATACAACTATCCACTCTTAAAAAATTAGCCTTAGTGGGATGTGAAAGTCTAAAGTCGGTGCCGTTTCACGCCATTAGAAATGTAAATGTTTTGGCTATCTCTAACTGCGACCAGTTGGAATTGTCAATGGGTGTTGGAAGTCAAATCCCCGATTCAAGGTTAAAGTATGTTGTTCTTAAAGACTTGCCGCAACTGGTCACGTTGCCTCGGTGGATTCAAGGATCTGCAAACTCTTTACAAAGCTTACTTATTTTAGGTTGCATCAATCTTAAGGAGCTTCCCGATTGGCTACCAACTTTAATTTATCTCAAATCTCTTGGTATTTGCGAATGTCCAAATCTGGTGTCACTGCCTGACAACATGCATCAGCTCACAAATCTTGAAAGATTAGAAATGACTGCTTGTCCTGAATTATGGAAAAGATTCAAGCCCGGAGTTGGACAGGATTGGTTATGCCAGCGTTCATGGCCCCAAATTTTGGCAACGGTGGATGTTGATGCCCTTTCCATTGCCATTCATTGGCTTATGAAGATGGTGAGAGAGGAAAGATGTGTGTAG 1803 0.3993 MAESLLFSFAESLIGKLATAAVQEASLALGVHSELKQMKATMALIKGVLLDAEKKNPQSSALNEWLTQIKRVFSDAEDIVDDFECEALRKHVVNTYGSCSRKVRRFFSSSNPVVYGLRMAHHIQDINTRLTKLSTQLSMFGLQIIDHDTRVVHVREMTHSHVNPSHVTGREHDKNEIVNLLMQDALGFLPPPKESESMVDVANHLVYELWSRSFLSDYFDLGADSTFTLHDLMYDLVVHIAKGEFERINLRNQKFPENAQHLVFMENNLHGQAFPHTGLKSVYLSQGMNNEAFLIKLVSRCKYLRILGLYSSEIESLPYSIGKLKHLRHLNLQFSKKLRRLPDSVCKLQNLQTLDLLGCVELQKLPKGMRNLISLRNLYITTKQVDFSEKDIAVLTTLENLNISYCDNLESLFNGIQLSTLKKLALVGCESLKSVPFHAIRNVNVLAISNCDQLELSMGVGSQIPDSRLKYVVLKDLPQLVTLPRWIQGSANSLQSLLILGCINLKELPDWLPTLIYLKSLGICECPNLVSLPDNMHQLTNLERLEMTACPELWKRFKPGVGQDWLCQRSWPQILATVDVDALSIAIHWLMKMVREERCV 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02481 600 SUPERFAMILY L domain-like 229 550 - -
Vian3g02481 600 Pfam Rx N-terminal domain 10 98 IPR041118 -
Vian3g02481 600 Gene3D Ribonuclease Inhibitor 256 563 IPR032675 -
Vian3g02481 600 CDD RX-CC_like 8 134 IPR038005 -
Vian3g02481 600 Gene3D - 10 124 - -
Vian3g02481 600 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 441 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02481 Vian-Chr3 38580201 38583920 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02481 314 401 WRKY Transcription Factor Family AT4G12020 36.364 4.89e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02481 - - vra:106770070 615.92