Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02441 ATGGATAATTTCATGAATCTCAAGGATTTCGAATTGAATCCCAACGATCGCTCCATCGAAGCCCTCGCCAAATGGAGATCCGCCGTGTGGCTCGTCAAAAACCCTCGCAGGCGATTCCGTTGGGTTGCCGATCTCGCCAAACGCAAACACGCAGAGGAGAAGCGCCGCAAACTACAGGGAAAGATTCGGGCCATTATCTATGCTGAAAGGGCAGCAATGCAATTTATGGAAGCTATTGCTCCAGCTGAATACAAGGTGTCAGAAAAGACGAGAGAAGCTGGTTTTGGCATTGAACCAGATGATATTGCCTCACTAGTTCGAGGCCATGATTACAAGAGCTATAAAAGAATCGGTCAAGTTGAAGCAATTATAGAGAAACTCGGTGCCTCGGTTGATGATGGTGTTGGTAGCGGCAGTATAGATACCAGGCAAGAGATTTATGGAGTCAACCGTTATACTGAGAAACCTTCTAAAAGCTTCCTGATGTTTGTTTGGGAAGCACTGCATGACTTAACACTAATCATTCTCATGGTCTGTGCGCTAGTTTCTATAGCCATTGGTCTTCCCACCGAAGGATGGCCAAAAGGTGTTTATGATGGTCTGGGAATCATACTTAGTATCTTCTTGGTAGTCAATGTTACTGCTATCAGTGACTATCAGCAATCCCTGCAGTTCAGGGATTTGGACAAGGAAAAGAAAAAGATCTTTGTTCAGGTTACAAGGGACAGAAAACGACAGAAGGTCTCAATTTATGATTTGGTTGTGGGAGATATTGTTCATTTGTCCACTGGTGATCAAGTTCCTGCTGATGGCATTTATATATCAGGATATTCTTTGGTAATTGATGAGTCAAGTTTGACAGGTGAGAGCGAACCAGTAAATATAGATGAAAAAAGACCTTTTCTTCTTTCGGGAACCAAAGTTCAAGATGGTCAGGGGAAGATGATAGTTACGACTGTCGGCATGAGGACTGAATGGGGAAAGTTGATGGAAACTCTAAGTGAGGGTGGAGAGGATGAGACTCCACTACAGGTGAAATTAAATGGAGTTGCTACAGTTATTGGTAAAATTGGTTTGACTTTTTCTGTGCTGACATTTCTGGTGTTGACAATAAGGTTTGTGGTGGAAAAAGCAATTACTGGTGATTTTTCCAGTTGGTCTTCAAATGATGCATTGAAGCTGCTGGACTACTTTGCTATTGCGGTAACCATAATAGTTGTTGCAATTCCTGAAGGATTGCCATTAGCTGTAACACTTAGTCTTGCTTTTGCAATGAAAAAGTTGATGAAGGATAAGGCACTTGTGAGACATCTTTCTGCTTGTGAAACTATGGGTTCGGCAACTTGCATCTGCACAGATAAAACAGGAACATTGACCACTAACCACATGGTGGTTAATAAACTTTGGATATGTGGCAGGAGCACGGAGATTAAAGGCTATGAGAGCGTTGACAAACTAAAGACAGAGGTACCTGAAGAAGTTTTAAGCATCCTTTTGCGAGCTATATTTCAAAATACTTCTTCTGAAGTAGTTAAGGACAAAGATGGAAATTCAACAACATTGGGCACACCAACAGAATCGGCATTATTGGAATTTGGCTTGCTTTCAGGTGGCGATTTTGATGCGCAGCGTGCAACATATAAGATACTTAAGGTTGAGCCTTTCAATTCAGTCCGGAAGAAGATGTCTGTGCTAGTAGGTCTTCCTGATGGAGGTGTTCAAGCTTTCTGCAAAGGTGCTTCAGAAATAGTATTAAAATTGTGTAACAAAGTTATTGATCCTAGTGGAATAGTTGTTGATCTTTCTGATGAGCAGGCAAAGAACGTCTCTGACATTATAAATGGATTTGCCTCTGAAGCTTTGAGAACTCTTTGTTTAGCTGTCAAAGATGTAAATGAATCCTCAGGGGAAACCAGCATCCCTGAAGATGGCTATACTCTGATAGCCATTGTGGGAATTAAGGATCCTGTGCGCCCTGGGGTTAAGGAAGCTGTTCAAACTTGCTTAGCTGCTGGAATAACTGTCCGCATGGTTACCGGTGATAACATAAATACAGCGAAAGCTATAGCTAAAGAATGTGGCATACTTACGTGGGATGGTGTAGCTATAGAAGGACCCCAATTTCGTGACTTGTCACCAGAGCAAATGGAGAGTATTATACCAAGAATTCAGGTTATGGCGCGATCCTTACCTCTTGACAAGCATACCTTAGTAACCCGTTTGAGGAATATGTTTCGTGAGGTTGTAGCTGTTACTGGCGATGGAACCAATGATGCTCCTGCACTGCATGAGTCGGACATTGGGCTTGCTATGGGCATAGCTGGAACTGAGGTTGCCAAAGAAAATGCGGATGTCATTATAATGGATGATAATTTCACTACTATTGTCAATGTGGCCAGATGGGGACGGGCCATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATATTGTTGCTCTGATTATTAACTTTGTTTCTGCATGTATCACAGGATCTGCTCCCCTCACAGCTGTTCAGTTGCTTTGGGTGAACTTGATTATGGACACTCTGGGTGCATTGGCTTTGGCCACTGAACCTCCGAATGATGGACTTATGCTAAGACCCCCTGTTGGAAGGACAACAAGTTTTATTACCAAATCCATGTGGAGAAATATTTTTGGTCAAAGTATATATCAACTAATTGTTCTTGCGGTTCTCACTTTTGACGGGAAGAGACTACTGAGAATTAATGGTCCAGATTCAACTATAGTGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTTTTCAATGAGATAAACAGCCGAGATATTGAAAAGATAAACATATTCAAGGGGATTTTTGAGAGCTGGATATTTTTTACGGTTATTTTGTCGACAGTGGTATTTCAGGTAATGATAGTTGAGTTCCTGGGAACACTTGCCAGCACAGTGCCTTTAAGCTGGGAATTCTGGGTACTCAGCGTGGTAATTGGAGCAATTAGCTTACCCATAGCTGCTATACTTAAGTGCATCCCAGTTGACAAAAGAGATGCCACAAACCACCATGATGGTTATGAGGCAGTGCCTTCTGATTCCGGTCCCGAGCTCACATAA 3114 0.4204 MDNFMNLKDFELNPNDRSIEALAKWRSAVWLVKNPRRRFRWVADLAKRKHAEEKRRKLQGKIRAIIYAERAAMQFMEAIAPAEYKVSEKTREAGFGIEPDDIASLVRGHDYKSYKRIGQVEAIIEKLGASVDDGVGSGSIDTRQEIYGVNRYTEKPSKSFLMFVWEALHDLTLIILMVCALVSIAIGLPTEGWPKGVYDGLGIILSIFLVVNVTAISDYQQSLQFRDLDKEKKKIFVQVTRDRKRQKVSIYDLVVGDIVHLSTGDQVPADGIYISGYSLVIDESSLTGESEPVNIDEKRPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFLVLTIRFVVEKAITGDFSSWSSNDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVNKLWICGRSTEIKGYESVDKLKTEVPEEVLSILLRAIFQNTSSEVVKDKDGNSTTLGTPTESALLEFGLLSGGDFDAQRATYKILKVEPFNSVRKKMSVLVGLPDGGVQAFCKGASEIVLKLCNKVIDPSGIVVDLSDEQAKNVSDIINGFASEALRTLCLAVKDVNESSGETSIPEDGYTLIAIVGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNINTAKAIAKECGILTWDGVAIEGPQFRDLSPEQMESIIPRIQVMARSLPLDKHTLVTRLRNMFREVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVARWGRAIYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMLRPPVGRTTSFITKSMWRNIFGQSIYQLIVLAVLTFDGKRLLRINGPDSTIVLNTLIFNSFVFCQVFNEINSRDIEKINIFKGIFESWIFFTVILSTVVFQVMIVEFLGTLASTVPLSWEFWVLSVVIGAISLPIAAILKCIPVDKRDATNHHDGYEAVPSDSGPELT 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02441 1037 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Vian3g02441 1037 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Vian3g02441 1037 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Vian3g02441 1037 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Vian3g02441 1037 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Vian3g02441 1037 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Vian3g02441 1037 Pfam E1-E2 ATPase 236 430 - -
Vian3g02441 1037 FunFam Calcium-transporting ATPase 461 656 - -
Vian3g02441 1037 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian3g02441 1037 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian3g02441 1037 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian3g02441 1037 Pfam Cation transporting ATPase, C-terminus 837 1010 IPR006068 -
Vian3g02441 1037 FunFam Calcium-transporting ATPase 210 334 - -
Vian3g02441 1037 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 661 IPR023299 GO:0000166
Vian3g02441 1037 SUPERFAMILY HAD-like 450 857 IPR036412 -
Vian3g02441 1037 Pfam Cation transport ATPase (P-type) 507 591 - -
Vian3g02441 1037 Gene3D - 464 653 IPR023299 GO:0000166
Vian3g02441 1037 NCBIfam HAD-IC family P-type ATPase 717 840 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian3g02441 1037 NCBIfam HAD-IC family P-type ATPase 203 515 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian3g02441 1037 CDD P-type_ATPase_Ca_PMCA-like 140 885 - -
Vian3g02441 1037 Gene3D - 770 1013 - -
Vian3g02441 1037 Pfam Ca2+-ATPase N terminal autoinhibitory domain 8 49 IPR024750 GO:0005516
Vian3g02441 1037 Gene3D - 17 78 - -
Vian3g02441 1037 FunFam Calcium-transporting ATPase 649 797 - -
Vian3g02441 1037 Gene3D - 166 463 - -
Vian3g02441 1037 FunFam Calcium-transporting ATPase 17 77 - -
Vian3g02441 1037 SMART Cation_ATPase_N_a_2 116 188 IPR004014 -
Vian3g02441 1037 PANTHER CATION TRANSPORTING ATPASE 87 1013 - -
Vian3g02441 1037 SUPERFAMILY Calcium ATPase, transduction domain A 236 332 IPR008250 -
Vian3g02441 1037 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Vian3g02441 1037 Pfam Cation transporter/ATPase, N-terminus 119 183 IPR004014 -
Vian3g02441 1037 Gene3D - 654 769 IPR023214 -
Vian3g02441 1037 SFLD p-type atpase 433 805 IPR044492 -
Vian3g02441 1037 SFLD Haloacid Dehalogenase 433 805 - -
Vian3g02441 1037 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vian3g02441 1037 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 1013 IPR023298 -
Vian3g02441 1037 Gene3D - 202 309 - -
Vian3g02441 1037 FunFam Calcium-transporting ATPase 769 1015 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02441 Vian-Chr3 37896075 37906203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02441 61 1034 Primary Pumps ATPases AT3G57330 71.663 0.0 1445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02441 K01537 - gmx:100791934 1804.26