Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02430 ATGGCTGATTACGACCTTACCCCTCGGATGGCGCCGAACCTCGACAGGCATTTGGTGTTCCCTCTCCTGGAGTTTCTGCAGGAGCGCCAGCTATACGACGATGACCTCATCCTGAAGGCGAAGATCGACCTCCTCAACAACACCAACATGGTTGATTACGCCATGGACATCCACAAGAGTCTCTACCACACCGAGGATGTTCCTCATGACATGGTTGAGCGCCGAGCCGAGGTTGTCGCCCGCCTCAAGTCCCTCGAGGAGGCCGCCGCGCCCCTCGTCTCCTTCCTCCAGAACGCTGCCGCCGTGCAGGAGCTTCGTGCTGACAAGCAGTATAACCTCCAGATGCTCAATGAGCGATATCAGAGTTTTGCATCGCCTTTGAACCAGGTGCAGAGCAGAATATGGCTGATGCATTGGAGTCTATTCATCTTTTTTAATCATGACAATGGAAGAACACAAATAATTGATCTGTTCAATCAGGACAAAGTGCTTGCTGAGAAGTTAAATCTGAATTATGAGGAGGCTGAGAGATGGATTGTTAATCTCATCCGTAGCTCAAAGCTTGATGCGAAAATTGACTCTCACACTGGAACCGTTATCATGGAGCCTAATCATCCAAACGTGTATGAGCAACTGATAGACCATACCAAGGCCCTTAACGGGCGCACCTACAAATTGGTTAGTCAACTTCTGGAGCATGCACAAGGTCAAGCAGCCCGATAA 723 0.5007 MADYDLTPRMAPNLDRHLVFPLLEFLQERQLYDDDLILKAKIDLLNNTNMVDYAMDIHKSLYHTEDVPHDMVERRAEVVARLKSLEEAAAPLVSFLQNAAAVQELRADKQYNLQMLNERYQSFASPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKVLAEKLNLNYEEAERWIVNLIRSSKLDAKIDSHTGTVIMEPNHPNVYEQLIDHTKALNGRTYKLVSQLLEHAQGQAAR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02430 240 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 163 237 IPR016650 GO:0003743|GO:0005737|GO:0005852
Vian3g02430 240 SUPERFAMILY "Winged helix" DNA-binding domain 163 206 IPR036390 -
Vian3g02430 240 Pfam PCI domain 163 202 IPR000717 -
Vian3g02430 240 Pfam eIF3 subunit 6 N terminal domain 5 121 IPR019010 -
Vian3g02430 240 SMART eIF3_N_2 5 121 IPR019010 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02430 163 240 Eukaryotic Initiation Factors Gene Family AT3G57290 83.333 7.85e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02430 K03250 - gmx:100797748 224.172