Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02428 ATGGAAAGTCACGGAGGAGGTAAGTGGAAGATACTGTTGCCCTTACTTTTTCTCTCTCTGATCTCCACCGTCCGATCATCATCCGCCTTACGATTCCGACCGGTGTGCGGTGTGTCGGAGAGACAGGTTCGGATGCCGGAGGGTGCAGCCTTCAAGATTGGGCTCTTCGCGGACCTTCATTTTGGGGAGGACGCGTGGACGGAGTGGGGCCCACGCCAAGACCTGAACTCCATCAACGTCATGAACTCGGTGCTCCACCATGAAAATCCAGATTTGGTGATATATCTTGGTGATGTCATCACGGCAAACAACATAATGATTGCGAATGCAAGCTTGTATTGGAATCAGGCAATCTCCCCAACAAGAAACAGGGGCATACCATGGGTTAGTGTATTTGGAAACCATGATGATGCTGCATTTCAGTGGCCATTGGAGTGGTTCTCTCCGCCTGGCATTCCTCCAATTCACTGCCCTCTAACCACAACTTCATATTCAGGAGACGATGAATGTAGCTTCAAAGGAACAGGACGATTGGAGCTGATGTCAAATGAGATGAAGCACAATGGATCATTTTCTAGCTATGGCCCAAGAAATCTTTGGCCAAGTGTATCCAACTATGTCCTTCAAGTTTCATCGCCTGATTATCCACCATCACCAGTGGCTTTCCTTTACTTTCTTGATTCTGGTGGTGGTTCCTATCCAGAACTCATATCTAATGACCAGGTAGAATGGTTCCGCCGAAAAGCTGAAGAAATTAACCCTGACAAAAGAGTTCCGGAGATTGTTTTCTGGCATATTCCAAGTACGGCTTATAAGGTGGTGGCTCCCAAGTTTGAGATACGAAAACCTTGTGTAGGATCGATCAACAAGGAAAGTGTCGCTGCTCAAGAAGTTGAAACGGGTATCATGGATCTTCTTCTCAACAGAACTTCTGTCAAGGCAATTTTTGTTGGACACAACCATGGATTGGACTGGTGCTGCCCATACAATAATCTATGGTTATGCTATGCTAGGCACACTGGTTACGGTGGCTATGGAGATTGGCCCAGAGGAGCACGAATTTTACAGATCAACCAAACACCATTTTCTCTTCATTCTTGGATAAGGATGGAGGATGGTCAAGTGCACAATGAAATTGACAGTAGCAACAGCAGAGGGACAAGAGAGACCCCATGGAGTTCAATGGAGTTTGCCTTTTCAGCAACCACAAGTCATCCAAAGCAGAAATGTGCTTCAAGAACAGAAATGTTGTGTGAAGAATTCGGTTTGAATGATGCCATAAATCTTCATGGCAAAGAGAAAGAGCTGGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTCATAAGACTGCAAGCCATAATTCGTGGACAAGCTGTGAGACGTCAAGTGTCAAACACTATACAGAATTTTCACTCCAATGCAAGAAATCAAGTGGAAATTCTGGAAAAAAGTAGCCATATGGCTGAACATACCAAGCAAAATCCTAAGCAAAAGAAAAAGTTAGAAGATAAGGAACTGAAGTGGTTCAATTCATTTGACTTGGTGCATATTCTGAATGCGATAGTCAAAGAACATGGGATTGTAGCTTGCTATCTAGAGAAGACATTGAAGCTATATGGTACAGAAAACAAGATGCCATGGTCAAAAGAGAGCGAGAGAAAAAATCCAGAAATGGTGGAAGAATGTATGCAGAACATGAAGTTTGGAAGAGAGAGCTGTCGTACACTTGGAGAGTGGCTGCATAAAGAAACATGCGATTTGAATATGATGTATAAGCCAATAACTCTTCCTACAAACTTGATGACAGCAAAACAAGAATGGCAAGAAGGATTGAGTCCACAGATTTCAATCCCAAGGAAATCATTTTCTGTTGTAAAAAGAAGTTTAAATGGGGATGAAAATTCAATGTCAAATTCTCCAGTTTTTCCTACATACATGGCTGTTACTGAATCCAGCAAAGCAAAAATGAGGTCTGTTAGCACACCAAAGCAAAGAACAGGAATTCTTGACATATGCTCCAATCACAATGAAGGAATTTCCTTTTACTCTTCTTGTTATGGTGAAACTAGCAGCACCAATGAAAACCATGCAAGTTACCAACAAAGATGCTAA 2112 0.429 MESHGGGKWKILLPLLFLSLISTVRSSSALRFRPVCGVSERQVRMPEGAAFKIGLFADLHFGEDAWTEWGPRQDLNSINVMNSVLHHENPDLVIYLGDVITANNIMIANASLYWNQAISPTRNRGIPWVSVFGNHDDAAFQWPLEWFSPPGIPPIHCPLTTTSYSGDDECSFKGTGRLELMSNEMKHNGSFSSYGPRNLWPSVSNYVLQVSSPDYPPSPVAFLYFLDSGGGSYPELISNDQVEWFRRKAEEINPDKRVPEIVFWHIPSTAYKVVAPKFEIRKPCVGSINKESVAAQEVETGIMDLLLNRTSVKAIFVGHNHGLDWCCPYNNLWLCYARHTGYGGYGDWPRGARILQINQTPFSLHSWIRMEDGQVHNEIDSSNSRGTRETPWSSMEFAFSATTSHPKQKCASRTEMLCEEFGLNDAINLHGKEKELARKALRALKGVIRLQAIIRGQAVRRQVSNTIQNFHSNARNQVEILEKSSHMAEHTKQNPKQKKKLEDKELKWFNSFDLVHILNAIVKEHGIVACYLEKTLKLYGTENKMPWSKESERKNPEMVEECMQNMKFGRESCRTLGEWLHKETCDLNMMYKPITLPTNLMTAKQEWQEGLSPQISIPRKSFSVVKRSLNGDENSMSNSPVFPTYMAVTESSKAKMRSVSTPKQRTGILDICSNHNEGISFYSSCYGETSSTNENHASYQQRC 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02428 703 ProSiteProfiles IQ motif profile. 445 472 IPR000048 GO:0005515
Vian3g02428 703 FunFam Predicted protein 154 363 - -
Vian3g02428 703 Gene3D - 49 370 IPR029052 -
Vian3g02428 703 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 15 380 - -
Vian3g02428 703 Pfam Calcineurin-like phosphoesterase 51 321 IPR004843 GO:0016787
Vian3g02428 703 SUPERFAMILY Metallo-dependent phosphatases 51 367 IPR029052 -
Vian3g02428 703 Pfam Protein of unknown function (DUF4005) 627 666 IPR025064 -
Vian3g02428 703 CDD MPP_Dcr2 51 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02428 Vian-Chr3 37677399 37689597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02428 436 703 IQD Protein Family AT5G03960 33.684 3.89e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02428 - - gmx:100803047 662.144