Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02385 ATGTATAGTGATGCTGAGGCCGAATCTGAATCTGAACGCAACAGAATGAGTTCTGGCGCTGATGAAGAAGAACAAGGTTCCTTCAAGAGCTTGGCCAAGCAAACGGAGCAGAGTTACCAGTTGCAGCTCGCACTCGCGCTTCGTCTCTCTTCTCATGCTTCTTCTTCGTCCGATCACTCTTCCTCTCCGACTCAGACGTTATCACACCGTTTCTGGGTGGATGGTTGTTTGCAATACTCTGACAAAATTTTAGATGGCTTTTACTTAATCCATGGGATGGATGCATATACATGGACTCTAAGTACTGATTTGCAGAATGTTGGTATTATTCCATCATTTGAATCACTCATGTCAGTTGAACCCAGTGACGACTCATCAATTGTTGTGGTTGCTGTTGATAAATCTAGAGATCCTGGTTTGAGAGAACTGCAAAACAGGGTAGCAAGTCTTTCAAATAACTGGATTACCACTAAAGATGCAACTGATCAGCTTGCAAGTCTTATTTGCAATAGGATGGGGGGAGGGTCTTTAACTGAGGAAAATTTAGTTATACGCTGGAAGGAATGCACCCAACTTCTTAAAAGCTGCCTGCACTCTGTCATTCTTCCAATTGGAAGCTTACCCATTGGCCTTTGTGTCCATCGAGCGTTGCTGTTTAAAGTGTTGGCTGACTTAATCAATCTACCATGCCGTATTGCAAAGGGATGCAAGTATTGCAGAAATGATGTGGGAGCGTCATGCATAGTTCAATTTGGTTCTGACAGGGAGTATATGATTGATTTAATTGGAAGGCCTGGGGCAACATGTCAACCTGATTCTTTTCTGAATTCTGCTTCTTCAATGTTGGTTGCTTCACCATTATGTCATCCAAAGTTCAAGCCAGTTGAAACAGCTGAATATACAAAGACACTTGCTCAATTGTATTTCTTGGACAGTCAAGCACTGCATCTTGTATTTGATACTACATCAGGACCTGCTGTTAATCACAGTGACAAAATGGATCTGCAGCGAACCGAAGCTTTGGGTGCAAATTATGCCGGTGGAAACAGCCATCTGATTGCTTTGATTCCTGGTGCAGAGGAGTATGCGTATTTCAATGAAGTAGACCAGACAGTCTTGGATTATCCAAGTCATGAAGTTGATCTTGACGAGGAGGATCTGGATATTCCTTGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTCCTTCGTGCAGACTGGCGTGGTTCCGATGTTGCAGTGAAAATTCTTAAAGTGCAAGGTTTTGATCCTGGGCGATTTGAAGAATTTCTAAAGGAGGTCTCACTCATGAAGCGCCTACGGCATCCAAATATTGTACTCTTGATGGGTGCAGTTATTCAACCCCCTAAGTTATCAATTGTAACAGAGTATTTATCTAGAGGCAGTTTGTATGAACTTCTGCACATGCCCAATGTTGGATCATCACTTAGTGAGAGGTGTCGCTTAAAAATGGCTTATGATGTGGCAAGCGGAATGAATTATCTTCATCAAATGAGACCCCCCATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTTGATGATTCATACACTGTTAAGGTATGTGACTTTGGTCTTTCACGCACAAAGGCAAACACATTTCTTTCTTCTAAAACCGCAGCTGGGACTCCTGAATGGATGGCACCCGAAGTCATCAGAGGAGAACTGTCAAACGAAAAGTGTGATGTATTCAGCTTTGGTGTAATTTTGTGGGAACTAGTCACCCTGCAACAACCATGGAGACATTTAAATCCTTCACAAGTTGTTGCGGCTGTTGGTTTTATGGACAAAAGGCTAGATATTCCAAGGCATGTGAATCCTGAAGTTGCAGCCTTGATTGAACTCTCCTGGGCCACGGAACCCTGGAGACGGCCTTCTTTCTCCTATATTATGAAATGTTTGCAGCAAATAATTGCTGATGCTAGAGGGTGA 1974 0.4276 MYSDAEAESESERNRMSSGADEEEQGSFKSLAKQTEQSYQLQLALALRLSSHASSSSDHSSSPTQTLSHRFWVDGCLQYSDKILDGFYLIHGMDAYTWTLSTDLQNVGIIPSFESLMSVEPSDDSSIVVVAVDKSRDPGLRELQNRVASLSNNWITTKDATDQLASLICNRMGGGSLTEENLVIRWKECTQLLKSCLHSVILPIGSLPIGLCVHRALLFKVLADLINLPCRIAKGCKYCRNDVGASCIVQFGSDREYMIDLIGRPGATCQPDSFLNSASSMLVASPLCHPKFKPVETAEYTKTLAQLYFLDSQALHLVFDTTSGPAVNHSDKMDLQRTEALGANYAGGNSHLIALIPGAEEYAYFNEVDQTVLDYPSHEVDLDEEDLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDPGRFEEFLKEVSLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLHMPNVGSSLSERCRLKMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGELSNEKCDVFSFGVILWELVTLQQPWRHLNPSQVVAAVGFMDKRLDIPRHVNPEVAALIELSWATEPWRRPSFSYIMKCLQQIIADARG 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02385 657 FunFam Serine/threonine-protein kinase isoform 1 384 472 - -
Vian3g02385 657 CDD STKc_MAP3K-like 400 646 - -
Vian3g02385 657 MobiDBLite consensus disorder prediction 1 33 - -
Vian3g02385 657 FunFam Serine/threonine-protein kinase CTR1 473 656 - -
Vian3g02385 657 ProSiteProfiles Protein kinase domain profile. 394 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g02385 657 ProSitePatterns Protein kinases ATP-binding region signature. 400 421 IPR017441 GO:0005524
Vian3g02385 657 Pfam Protein tyrosine and serine/threonine kinase 395 648 IPR001245 GO:0004672|GO:0006468
Vian3g02385 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Vian3g02385 657 Gene3D Phosphorylase Kinase; domain 1 387 472 - -
Vian3g02385 657 MobiDBLite consensus disorder prediction 1 29 - -
Vian3g02385 657 PRINTS Tyrosine kinase catalytic domain signature 556 566 IPR001245 GO:0004672|GO:0006468
Vian3g02385 657 PRINTS Tyrosine kinase catalytic domain signature 619 641 IPR001245 GO:0004672|GO:0006468
Vian3g02385 657 PRINTS Tyrosine kinase catalytic domain signature 509 527 IPR001245 GO:0004672|GO:0006468
Vian3g02385 657 PRINTS Tyrosine kinase catalytic domain signature 468 481 IPR001245 GO:0004672|GO:0006468
Vian3g02385 657 PRINTS Tyrosine kinase catalytic domain signature 575 597 IPR001245 GO:0004672|GO:0006468
Vian3g02385 657 SMART serkin_6 394 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g02385 657 Gene3D Transferase(Phosphotransferase) domain 1 473 656 - -
Vian3g02385 657 Pfam Ethylene-responsive protein kinase Le-CTR1 64 267 - -
Vian3g02385 657 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 62 651 - -
Vian3g02385 657 SUPERFAMILY Protein kinase-like (PK-like) 378 648 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02385 Vian-Chr3 37092063 37110409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02385 32 655 MAP Kinase Kinase Kinase AT5G03730 58.129 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vian3g02385 PK_Tyr_Ser-Thr 5.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02385 K14510 - gmx:100807496 1170.99