Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02373 ATGAGAGAAGAAGAATCAAATTGGTTCGAAGAGTTACCTTCACCGGAGGAACTCATGCCCTTATCCCAAACCCTAATAAGCCCTCATCTTGCCGTAGCTTTTGACATAACAAACTCTTCCCACCACCAATTTCCACTTCAGCCACCTTCCGCCGCCGAGGACGAACCGGCGCGAACACTCAAGCGGCCCAGACTCGTGTGGACCCCACAGCTCCACAAGCGCTTCGTCGATGCCGTCGCCCACTTGGGGATCAAGAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGTTTGACCCGGGAAAACGTCGCCAGCCACCTCCAGAAATACCGCCTCTACTTGAAGCGCATGCAGGGTTTGGCCGGAGGTTCCGCCGCCGACTCCGCCACGGACCACCTATTCGCCAGCTCGCCTGTGCCGCCGCACTTCCTGCACCCCGCTACCCGCCCGGCCTCTGACCATTACCTGCCCTTTGTGCCGGGGTTGCAGCAGCACCGCAATCACCACCACCACCAGCACATGGCGGTGCCTGCTCATTTTGGCTCGCCACGGAATGCGCACTTTGAACTCCCCGTTCTGTCGAGGATGGGAGCTTCGGTGCCGGGTTACGTGGAGGATGTGGAGTCGGGAGGGAGGAAGGTTCTTACTTTGTTTCCAGCTGGAGATGATTGA 681 0.5844 MREEESNWFEELPSPEELMPLSQTLISPHLAVAFDITNSSHHQFPLQPPSAAEDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLAGGSAADSATDHLFASSPVPPHFLHPATRPASDHYLPFVPGLQQHRNHHHHQHMAVPAHFGSPRNAHFELPVLSRMGASVPGYVEDVESGGRKVLTLFPAGDD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02373 226 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 6 178 IPR044841 GO:0003700|GO:0006355
Vian3g02373 226 Pfam Myb-like DNA-binding domain 66 114 IPR001005 -
Vian3g02373 226 FunFam Two-component response regulator 58 121 - -
Vian3g02373 226 Gene3D - 59 121 - -
Vian3g02373 226 SUPERFAMILY Homeodomain-like 59 119 IPR009057 -
Vian3g02373 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 118 IPR017930 -
Vian3g02373 226 NCBIfam myb-like DNA-binding domain, SHAQKYF class 63 115 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02373 Vian-Chr3 36852662 36853342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02373 1 226 G2-like Transcription Factor Family AT5G05090 52.747 2.20e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian3g02373 Myb_DNA-binding 1.4e-08 CL0123