Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02371 ATGGGAATAGAGATTCTGGAGCCTAACACATGCATCAGGGGTTGCTGCACCAGCCCCTCTATTCCCCTTCATCTTCCTCCAGCTTCTTATACTGTCCTCTCTCCTATTGCTCGAGGGGCTGAGAGTGTTGTTTATGAAGGGACTTTGGATGGCATGAGGGTTGCTGTGAAGAAACCCATCTTGTCAACTTCAGAAGACATTAATAAGTTTCATAAAGAATTGCAATTGCTGTGCAAGTTAGATCACCCGGGAATTGCGACATTGATTGCGGCCCATGCAAAACCACCCAATTACATGTTTTTCTTCAAGTTATATGAATCTCGGAATCTTGCACAGAAGTTGCATGTAGAAGAGTGGATACCAACTCTTAATGATGCACTAATGATGGCAATGCAATTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTGTGCATAGAGATGTGAAACCGGCAAATATTCTTCTTGACAAAAGTCTTTGTCCATACCTCACAGATTTTGGTTTGGCAGAATACAAGAATGATCTTAAGGGAGTTTCTATTCAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTCCACAAAAAGAATATGGTTGGAACGGTCATTTACATGGCACCTGAAATATTAAGAAAGGAGTTACATACAGAAAAATCTGATGTATACAGTTTTGGGATATCAATCAATGAACTCCTTACTGGTGTTGTGCCATATACAGATCTTCATACAGAAGCTCAAGGTTTGTTTGCCTTAATGAATGAGTCCAATCCGTGGCCCTTGATGGAGATAGCCACCGCACTTGGAGACACCGCTAATGGTGCGACCAAGGACATCTTCATCGCCGCCACTCGCAGCTTACAGCACCACCAATACCACCAACGAAATGTGTGGACCTCACTTCCTCCCACTCTCCAAATCGCGGGAAAAGTTAGTGGTGAGGCTGAGAAGAAGGAACGTATTGGTGAAAGGAATAGTGATTTGGGGGATAGGAAGAAATGGAAGGTGAGGGGGCTTGAGGCTCACACAGTGCTTGAGATGAACTATACCGAACAGCAACTAACAGCAGCTGTTGTTTCTCATGGATTACGACCCGCACTTGCTACTGAGGACTTGGGTATACCATCCAGATTATTATCAATGATAAACAAATGCTGGGATGGAAATCCTAATAACAGACCCACTTTTGATGAAATAGTCAAGGAACTTGATTTGATTTTGGAGCACTGCAAATTAAAAAAGGAAGAAGATATTTATGTCAGGCCTGTTAACTTGCATGTTGATCAACCTGTGGACAACACTGAACACCTTCAGGCTTATCAAGAGAGTTTTAGTTGGTCCACACGCGGTGAACTTTTGACTGCCACTAGTGCAAATAATTCTGGTTTGATAACTGGGTGTGAGTTTTATGACAAGCCTTCTGTATACCACCCAATACTGTCTTGGGGATCTTATGCTACCTGTGGAAGAAGGGAAACTATGGAGGATACACATTTCATTCTGCCCCGTATTTGTGATGAGAAGGATGTCTATGCTTTTGGCATCTTTGATGGCCATAGGGGTGCAGCTGCTGCTGAGTTTTCTTCTAGAGCTGTACCAGCTGTTTTGCAGACTTCAGGTTTTATGGGCAGTCCTGCTAATGCACTAATGGAAGCATTCATTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCTTATCGCAAATCTAACAGATGTATCCAGAAGGATTGGCATCCTGGGTGTACAGCCATTACTGCTCTTATAGTCAGAAACAAGTTATTTGTTGCTAACGTTGGTGATTGCAGAGCAATCATATGTCGTACTGGTAATCCAATTTCCTTAAGTAAGGATCACGTCGCAAGCTGTCCTCAAGAGAGAGAACGTGTTATTCGTCAAGGTGGCCATGTACATTGGCAAGTTGACACTTGGAGGGTTGGTCTTCCTGCACTTCAGGTTACACGTTCTATTGGTGATGATGATCTGAAGCCTGCTGTCACTGCAGAACCTGAGATAACTGAAAATACCTTGTGCCCAGATGACGAGTTTCTGGTCATGGCTAGTGATGGCCTGTGGGATGTGATAAGCAGTACAGAGGTCATAAATATCATAAAAGATACTGTTAAAGAGCCTGGAATGTGTTCTAAGAGGTTGGCTACTGAAGCAGTAGAACGTGGCAGCAAAGATAACATAACAGTTATAGTTGTTTTCTTACGTCCTGTGTCCACTGCAGAGAGAATTTACTAG 2250 0.4311 MGIEILEPNTCIRGCCTSPSIPLHLPPASYTVLSPIARGAESVVYEGTLDGMRVAVKKPILSTSEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESRNLAQKLHVEEWIPTLNDALMMAMQLAKALQYLHNLGIVHRDVKPANILLDKSLCPYLTDFGLAEYKNDLKGVSIQNWKSSGKPTGGFHKKNMVGTVIYMAPEILRKELHTEKSDVYSFGISINELLTGVVPYTDLHTEAQGLFALMNESNPWPLMEIATALGDTANGATKDIFIAATRSLQHHQYHQRNVWTSLPPTLQIAGKVSGEAEKKERIGERNSDLGDRKKWKVRGLEAHTVLEMNYTEQQLTAAVVSHGLRPALATEDLGIPSRLLSMINKCWDGNPNNRPTFDEIVKELDLILEHCKLKKEEDIYVRPVNLHVDQPVDNTEHLQAYQESFSWSTRGELLTATSANNSGLITGCEFYDKPSVYHPILSWGSYATCGRRETMEDTHFILPRICDEKDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTSGFMGSPANALMEAFIRTDAAFRKELDSYRKSNRCIQKDWHPGCTAITALIVRNKLFVANVGDCRAIICRTGNPISLSKDHVASCPQERERVIRQGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITENTLCPDDEFLVMASDGLWDVISSTEVINIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02371 749 ProSiteProfiles PPM-type phosphatase domain profile. 482 739 IPR001932 -
Vian3g02371 749 Pfam Protein kinase domain 30 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g02371 749 Gene3D Transferase(Phosphotransferase) domain 1 340 445 - -
Vian3g02371 749 SUPERFAMILY PP2C-like 474 741 IPR036457 -
Vian3g02371 749 SMART PP2C_SIG_2 497 739 IPR001932 -
Vian3g02371 749 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 405 - -
Vian3g02371 749 Pfam Protein phosphatase 2C 487 732 IPR001932 -
Vian3g02371 749 Gene3D Transferase(Phosphotransferase) domain 1 21 286 - -
Vian3g02371 749 SMART serkin_6 30 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g02371 749 CDD PP2Cc 484 739 IPR001932 -
Vian3g02371 749 Gene3D - 475 744 IPR036457 -
Vian3g02371 749 SMART PP2C_4 472 737 IPR001932 -
Vian3g02371 749 SUPERFAMILY Protein kinase-like (PK-like) 23 431 IPR011009 -
Vian3g02371 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Vian3g02371 749 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 473 743 - -
Vian3g02371 749 ProSiteProfiles Protein kinase domain profile. 30 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02371 Vian-Chr3 36821749 36830345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02371 341 749 PP2C-type Phosphatase Gene Family AT2G40860 59.420 2.98e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Vian3g02371 Pkinase 7.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02371 - - vum:124848565 818.535