Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02358 ATGGATATGTACATTCGAGTTAAACGTAGTAAGACAACATACTTCATCCGGTGCAAGGCATCTGATAAAATTAGTGACATAAAGCAGAAGTTGCAAGAACTTGTTGATCAACCAACTAATAATCAACGGTTAATTCTACCTGGTACAGGGGAAGTATTAGAAGACTCTAAGACTTTGGCAGATCAAAAGGTAGAGAATGATGCTGTTGTAGCACTGACCTTGAGAAAAGATGATAATGAGTTTGAGGAGGTCAACATTGTTCGGCCTAACGATTTCTACCAAGCTCGGGATGCAGATGGTGCCAGTTGTTGGCATGATGAAATCCGTAATGGCTCAGGAAACATTTCCCCAAACGATTGA 360 0.4056 MDMYIRVKRSKTTYFIRCKASDKISDIKQKLQELVDQPTNNQRLILPGTGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVNIVRPNDFYQARDADGASCWHDEIRNGSGNISPND 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02358 119 SMART ubq_7 3 75 IPR000626 GO:0005515
Vian3g02358 119 Gene3D - 1 92 - -
Vian3g02358 119 ProSiteProfiles Ubiquitin domain profile. 1 79 IPR000626 GO:0005515
Vian3g02358 119 SUPERFAMILY Ubiquitin-like 1 79 IPR029071 -
Vian3g02358 119 Pfam Ubiquitin family 5 76 IPR000626 GO:0005515
Vian3g02358 119 PANTHER OS03G0364000 PROTEIN 1 108 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02358 1 75 Cytoplasmic Ribosomal Protein Gene Family AT1G23410 33.333 4.49e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02358 K03873 - gmx:100306583 205.682