Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02354 ATGAAGAACTCTAGTTTGGAAAGTGGAATATTCATTGACAGTGATGAAGATGTGGAGAATGATCAGCATAAATATTTGAACGATGGAAACGATTCGGATTGTTCGAATTATTCCAATGAGAGGAAACCCAGCAACTACAACATGGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGTAGTGTACCATCACCAAATATTGGATTTCTGGGGACCACATCCCTGTCAAGATTAGGAAGTTCTTTTATTTCTTCATCTTTGACAAGGAGGCAAACTCTTGAAATATTACAACCAGAGAAAAAATCACTCTTGCAACCCACAGAAGAGGAGCAACTGCGACATACCTTGCTTCCTTCACAGCTATCTAGAAAGTCTTCCATTAGGAAAGATCCTTCCAAGGTTTCTCATGAAGTTCACATACCTGGCCAATGCACTTTTGGACAAGCTGTGCTTAATGGCATAAATGCTCTTTGTGGAATAGGAATCCTTTCAACCCCTTATGCTGTTAAAGAAGGTGGATGGGTTGGCCTTTCTATATTGTTATTGTATGCACTTTTTTCCTATTACACTGGTTTGCTTCTGCGTTACTGCTTGGATAGTTCACCTGGTCTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTACTATTGGACGTGTCATCATATCTGCTTGTTGCATTGAGTACATAATTGTGGAGAGTGACAACTTATCGACATTATTTCCAAATGCACACATTAATTTGGGTGGAATTGAAGTGAATGCACACATATTGTTTGCAATATTGACAGCTTTGGCTCTTCTTCCTACTGTTTGGCTTCGTGATCTACGCATTCTCAGTTACATCTCAGATGTTGTTATTGAAGCTTGTGGAGTTATTGCTACGGTTCTAGTGGTTGTATGCTTGATCTGGGTTTGCTTGGTAGACAAAGCTGCCATTGATGATAGCCAAGGAACAACAACCTTGAATCTCGCAACTTTTCCTGTTGCAATGGGTCTCTATGGTTACTGCTACGCAGGACATGCTGTGTTTCCAAATCTCTACACTGCCATGGCAAATCGGAATCAATTTCCTGGAGTGCTCTTAGTATGGTTTGGTAATGTCATTAACTGGATCTTTACTCACTATGTTTGTTGTAAGTGCCCTCAGTCATTGATTCTTCCTGCTGCTTGTTTTCTAAGCATAAGGGGTGGCAGAATCTCAAGCTTTCAGGTAGCACTTTGTGTTACAATTATTATTGTAGGTGTTGTATCAAGCTGTTTTGGATCATACTCATCCCTCGCTGAGATCATTGAGAAATTGTTTGGATAA 1320 0.4038 MKNSSLESGIFIDSDEDVENDQHKYLNDGNDSDCSNYSNERKPSNYNMAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFISSSLTRRQTLEILQPEKKSLLQPTEEEQLRHTLLPSQLSRKSSIRKDPSKVSHEVHIPGQCTFGQAVLNGINALCGIGILSTPYAVKEGGWVGLSILLLYALFSYYTGLLLRYCLDSSPGLETYPDIGQAAFGTIGRVIISACCIEYIIVESDNLSTLFPNAHINLGGIEVNAHILFAILTALALLPTVWLRDLRILSYISDVVIEACGVIATVLVVVCLIWVCLVDKAAIDDSQGTTTLNLATFPVAMGLYGYCYAGHAVFPNLYTAMANRNQFPGVLLVWFGNVINWIFTHYVCCKCPQSLILPAACFLSIRGGRISSFQVALCVTIIIVGVVSSCFGSYSSLAEIIEKLFG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02354 439 Pfam Transmembrane amino acid transporter protein 146 364 IPR013057 -
Vian3g02354 439 PANTHER OS05G0424000 PROTEIN-RELATED 154 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02354 Vian-Chr3 36474828 36489836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02354 1 369 Amino Acid or Auxin Permease AAAP Family AT2G39130 56.743 3.30e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02354 K15015 - gmx:100798108 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02354 3 36474828 36489836 Vian3g02354 3 36474828 36489836 ECH