Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02349 ATGCCAGGCATTCCTGTTGCCGCTCGTGCAACCTCAAGCCTCCATGATGCTTGTGAACATTTATCTGCGGAAGAGGAGCTTGCAGCTGAAGAGAGTCTTTCAATTTATTGCAAGCCCGTAGAATTTTACAATATTCTCCAGCGACGTGCCATGAGAAATCCATTATTTCTTCAGAGATGTTTGCACTACCAGATAAAGGAAAAACACAAGAAAAGAATACAAATGACAGTTTCCTTGATGCGGACTATTACGGAAAGTCAAAATGTGTTTCCCATGTCTATATGTCTCGCAAGGCGGGTTTCTGATTATGGATCTTCAAGGCAATCTGCCATGTATCGAATCGGTCGAATGTTCATCTTTCGAAACTCCCCTGGAATTGATTTAAATACTCAAGTCCAAGCAAATTTTACTCTTCCTGAAGTCAACAAGTTAGCTGATGAAGCTAGATCTTGCTCACTTGATATCTTGTTTGTCAGCACTGCCACTGTGAAAAACTCGAATTTATCATCTGGAGTCAATTCAAACTCCATGCCTTCGGATACGAATCATCTAGCTTTTTTTGAATCTGGAGAGTACTGCCTTTGGGGGAAAGTGTCTTTAGAATCACTTTATATGGCTTGGGATTGTTTTCCGAATTTTCGTTTGGGACAGCGAGCAGAGATTATGTCAACTGTTGATTTGCTTCCATGTATTCTGAAGTCAGATTTTAAAAACGACTACACAAGAGTGTCTATTCAAGTTCCTTCTAATTTCGAGAACATGAGTGCATCAAAACAAGTACAAATCACAATTTCTGCGGAAGAGTTTGGGGCCAAAGAAAAATCTCCCTGTATTTCATACACAGGCAGTGAAGTACCGTCCTCATCATTGTCTCACTTGATTGGATTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTACAATAATAAGTTACAGAGGACAGAAGTCACCGAAGATTTCACTTGTCCATTCTGTTTGGTTAAATGTTCTAGTTTTAAGGGTCTAAGATGTCATTTGTCCTCGTCACATGATCTCTTCAACTTTGAATTTTGGGTATCGGATGAGTGTCATGCTGTAAATGTGACTGTGAAGAATGATATCTCGAGATCAGAGATTGTTGCTGATACTGTTGATCCAAGAGTGCAAACATTTTTCTATTGTGGAAAGCCCCTTAAGCGTAGGACACCAAAGGACCCATCTTCTAAAAATGCAGTAGGCTTAGAGTCTGCCTTTCCTGCAGGAGAGACTGATATTTTGGAGAAGGATGATGGAATTTCTGCCACAATTATTAGATCACATCCTGATCGAGACTCTGTCCAGTCAATATCAGACTGTGATCAATCAGTGCTCCAGTTTGCCAAGACTAGGAAGTTGTCAATTGAGTGTTCTGACTCACGAAACAGTGCCCTATTAAGGAAACGACAGTTTTTTCATTCTCACAAAGCTCAGCCAATGACAATTGAACAAGTTCTATCAGATAAAGATAGCGAAGATGAAGTTGACGACGATGTTGCTGATTTTGAAGATAGAAGGATGCTTGAAAATTTTGTTGACGTGAGCAAGGATGAGAAGAATTTCATGCACATGTGGAACTCGTTTGTTCGGAAGCATCGTGTGATTGCAGATGGTCACATTTCATGGGCATGTGAGGCTTTCTCGAAATTGCATGCACCTGAGTTTGTTCGGTCACGCTCACTGGCCGGTTGTTGGAGAATATTTATGGTCAAACTATACAATCACGGTCTTCTGGATGCTCGAACCATGAATGACTGTAATGTTATTCTTGAGCAACAGCATAAGCAGAATTCAGACCCCATTAGCTAA 1827 0.405 MPGIPVAARATSSLHDACEHLSAEEELAAEESLSIYCKPVEFYNILQRRAMRNPLFLQRCLHYQIKEKHKKRIQMTVSLMRTITESQNVFPMSICLARRVSDYGSSRQSAMYRIGRMFIFRNSPGIDLNTQVQANFTLPEVNKLADEARSCSLDILFVSTATVKNSNLSSGVNSNSMPSDTNHLAFFESGEYCLWGKVSLESLYMAWDCFPNFRLGQRAEIMSTVDLLPCILKSDFKNDYTRVSIQVPSNFENMSASKQVQITISAEEFGAKEKSPCISYTGSEVPSSSLSHLIGLREGNVMFNYRYYNNKLQRTEVTEDFTCPFCLVKCSSFKGLRCHLSSSHDLFNFEFWVSDECHAVNVTVKNDISRSEIVADTVDPRVQTFFYCGKPLKRRTPKDPSSKNAVGLESAFPAGETDILEKDDGISATIIRSHPDRDSVQSISDCDQSVLQFAKTRKLSIECSDSRNSALLRKRQFFHSHKAQPMTIEQVLSDKDSEDEVDDDVADFEDRRMLENFVDVSKDEKNFMHMWNSFVRKHRVIADGHISWACEAFSKLHAPEFVRSRSLAGCWRIFMVKLYNHGLLDARTMNDCNVILEQQHKQNSDPIS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02349 608 PANTHER POLYCOMB GROUP PROTEIN 20 605 - -
Vian3g02349 608 CDD VEFS-box_EMF2-like 472 599 - -
Vian3g02349 608 CDD ZnB-Zn_EMF2-like 290 368 - -
Vian3g02349 608 Pfam VEFS-Box of polycomb protein 459 594 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02349 Vian-Chr3 36299979 36340146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02349 1 598 C2H2 Transcription Factor Family AT5G51230 53.943 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02349 - - gmx:100798991 1077.77