Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02336 ATGAGTGGGGAGATGAAGTTTGAGGAGGAGCAGAGAAGATACATAAAACCCTCCATAGCCACACCACCACACCTTCAAACCTTCAAACTCTCTTTACTTGACCAGCTTTTCCCAAACATCCATGGCAACATCACCTTCTTTTACCCTCACACCACCACCCACACACTTCCACACTTCTCCACCAAATCCCAACTCCTTCAAACCTCACTCTCCCAAACCTTGACCCGCTTCTATCCTCTCGCCGGAAACCTCCATGACGCCACCACCCTCCACTGCAACGACGCCGGTGCCTTCTTCATCCAATCCCAGTCCAATGTCTCTCTCTCCGACATCCTCAAAGCTCCGAGCTTCAACACCCTCCAATGTCTCCTCCCCTCCACGGATAACCAAACCTCAGCAAACGCGGCCATGCTCCTCATACGCTTCACTTCCTTTAGCTGCGGCGGCACCGCCGTAACCATTTCTCTCTCCCACAAAATCGCCGACATGGCAGTCGTCATCGCACTCCTCAAAACCTGGACCGCTGCCTGCGCCGGAGAAACCCCCACGAGGGACCCCGAACTCGCCGCCGGCGCCGCGCTCTTCCCTCCGAGAGAGCTTCCCGCAGTGACGGCATCCGTAAACACCGTGTCGTCGGAGAACTTCACGTCGAGGAGGTTCGTTTTCGAAGCGTCCAAGGTGAAAGCGCTAAAGAAGAGAATAGGAGAAGGTTGCGCGTTCGAACCTTCGAGGGTGGAGGTGGTGTTGGCTCTCATATGGAAATGCGCTCTCTCGGCTTCTCGCCCGGAAACGGCGTCGTTCAAGCATTCGGTTTTGTTCCAAGCGGTGAACCTCCGTCCCCGGATGGAGCCGGCGGTGGCGGACGGAGCCTTGGGGAACTTTGTATGGCCATTCGCGGTGACGGTGGAGGAGGAGGAGCAGTTGGAGTTGCAGGTGATGGTGAAGAGGATGAGGGAGAGTATGAAGGAGTTTGTGGAAAGTAAGGCAAAGAGGTTGAAAGAGGATGGTGGTTTTGGAGTGTTTATGGAGAGTCTGAAGGAGAGAGGTGAAGTTTTGAAGCAGAACAGCGTTGTTTATAAGTGTTCGAGTTGGTGCAAGTTTCCACTGGCTGAGGTTGATTTTGGTTGGGGCGAAGCAGTGTGGGCATGCAGTGTGAATAAGATTGCTAGTAACACCATTGCTTTGATGGATACAAGGGACGGTGGTGTTGAAGCTTTCGTCACTCTCGATCACCAACACATGCTTCTCTTTCAACAACATCACCTTCTTCTACACTACGCTTTGCTTAATCCCTCTGTTATGCTCTGA 1308 0.5321 MSGEMKFEEEQRRYIKPSIATPPHLQTFKLSLLDQLFPNIHGNITFFYPHTTTHTLPHFSTKSQLLQTSLSQTLTRFYPLAGNLHDATTLHCNDAGAFFIQSQSNVSLSDILKAPSFNTLQCLLPSTDNQTSANAAMLLIRFTSFSCGGTAVTISLSHKIADMAVVIALLKTWTAACAGETPTRDPELAAGAALFPPRELPAVTASVNTVSSENFTSRRFVFEASKVKALKKRIGEGCAFEPSRVEVVLALIWKCALSASRPETASFKHSVLFQAVNLRPRMEPAVADGALGNFVWPFAVTVEEEEQLELQVMVKRMRESMKEFVESKAKRLKEDGGFGVFMESLKERGEVLKQNSVVYKCSSWCKFPLAEVDFGWGEAVWACSVNKIASNTIALMDTRDGGVEAFVTLDHQHMLLFQQHHLLLHYALLNPSVML 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02336 435 Gene3D - 212 425 IPR023213 -
Vian3g02336 435 Gene3D - 5 203 IPR023213 -
Vian3g02336 435 Pfam Transferase family 6 421 - -
Vian3g02336 435 PANTHER F21J9.9 12 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02336 Vian-Chr3 36059430 36060737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02336 5 419 Monolignol Biosynthesis Gene Families AT5G48930 22.566 1.94e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02336 - - gmx:100808502 604.364