Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02292 ATGTTTCTCGCTGATGTGCCTCGAGCCGCCGTGTATCAGAAGCTCCACGGAATTTTGCATTTTCCTCCAAAAATGGCTTCTCAAAATCCAGCGGAAGAAGAAAACTCAAAGCAAAATTGGTCCCTCCAAGACTTCGAGATCGGTAAACCTCTCGGCAGGGGCAAATTTGGTAGAGTTTATGTTGCCAGAGAAGTCAAGAGTAATTTTGTTGTGGCGTTGAAGATTATATTTAAGGAACAAATTGATAAGTATAAAATTCATCACCAACTAAGGAGAGAGATGGAGATACAGACCAGTCTTCGGCACCCTAATATCCTGCGTCTTTATGGTTGGTTTCATGACACTGACCGTATTTTCTTGATTCTAGAGTATGCTCATAAAGGTGAGGTCTACAAAGAGATGAGAAAGAAGGGTCACTTTACAGAGAAACAAGCTGCTACGTATATTTTGAGCCTTACAAAGGCGTTGGCTTATTGCCACGAGAAGCATGTTATTCATAGGGATATCAAGCCTGAAAATTTGTTGCTGGATCACGAGGGTCGTCTTAAAATTGGAGACTTTGGTTGGTCTGTTCAGTCTAAAAGCAAAAGACATACCATGTGTGGCACATTGGATTATTTAGCACCAGAAATGGTTGAAAATAAAGCTCATGACTATGCTGTTGATAACTGGACTCTTGGTATCCTTTGTTATGAGTTCCTCTTTGGTGCCCCTCCATTTGAGGCTGAGAGTCAAGCTGATACCTTCAAAAGGATAATGAAGGTTGACCTAAGCTTCCCTTCCAACCCTTCTGTTTCTTTAGATGCCAAAAGTCTGATTAGCCGGCTTCTGGTGAAGGACTCCTCACGAAGGCTCTCTCTTCAGAAGATAATGGAACATCCTTGGATAGTCAAGAATGCAGATTTTTCGGGTATTTGCTTGTAA 924 0.4177 MFLADVPRAAVYQKLHGILHFPPKMASQNPAEEENSKQNWSLQDFEIGKPLGRGKFGRVYVAREVKSNFVVALKIIFKEQIDKYKIHHQLRREMEIQTSLRHPNILRLYGWFHDTDRIFLILEYAHKGEVYKEMRKKGHFTEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSKSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLFGAPPFEAESQADTFKRIMKVDLSFPSNPSVSLDAKSLISRLLVKDSSRRLSLQKIMEHPWIVKNADFSGICL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02292 307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Vian3g02292 307 SUPERFAMILY Protein kinase-like (PK-like) 34 299 IPR011009 -
Vian3g02292 307 SMART serkin_6 45 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g02292 307 CDD STKc_Aurora 44 297 - -
Vian3g02292 307 ProSitePatterns Protein kinases ATP-binding region signature. 51 78 IPR017441 GO:0005524
Vian3g02292 307 Pfam Protein kinase domain 45 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g02292 307 Gene3D Transferase(Phosphotransferase) domain 1 129 303 - -
Vian3g02292 307 FunFam Aurora kinase A 37 128 - -
Vian3g02292 307 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 31 301 IPR030616 GO:0004672
Vian3g02292 307 PIRSF ILK 14 295 - -
Vian3g02292 307 Gene3D Phosphorylase Kinase; domain 1 33 128 - -
Vian3g02292 307 FunFam Serine/threonine-protein kinase ark1 37 305 - -
Vian3g02292 307 ProSiteProfiles Protein kinase domain profile. 45 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02292 Vian-Chr3 35078898 35111238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02292 18 301 CBL-interacting serine-threonine protein kinases AT5G25110 37.586 5.91e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Vian3g02292 Pkinase 4.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02292 K08850 - gmx:100800111 548.125