Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02290 ATGGAAGCATGTGATGTGTTCGGAAGAGATAATGATAAAGAATCCTTGGTTGACTTGGTGTTGACTCATAATGAGAAAATAGGTATTATTCCCATTGTTGGAATGGGAGGAATTGGAAAAACCACCTTAGCTCAACTGATATACAATGATCAAAGAGTGCAGAAGGAATTTGATGTCAAAGCCTGGATTTATGTCTCTGAGGAATTTGACATTTGTAAGATTACAAAAACCCTTTTGGAGGCTGTCACGTCTTGTAGTTGTGACGTTGAGGATTTAAATTTTCTGCAGAGGGATCTAAAAATGCATGTAATGAACAAAAAGTTTTTGTTTGTGTTGGATGACGTGTGGAATGAAAATTATGACAATTGGGACAAGTTCAGGAGTCCATTTAAGCATGCTGGGGAACATGGAAGTAAGATTATTGTAACTACTCGAAGTGGGTGTGTTGCATCCATCATGCAGACTGTTTCACCCTATAATCTCAGAGAGTTGTCCAATGAAGATTCCTGGAATTTATTTTCAAAACATGCATTTGATTATGGTGATTCAAGTTTGCAATTGCATCAAAGTTTAGACAAAGTTGGGAGAGAAATAGTGAGGAAGTGCAAAGGGTTGCCTTTGGCTGTGAAGACACTTGCAGGACTTTTGAGGTGTAAAAGTGATAGACAAGAATGGTGTAAAGTACTGGACAGTGAGATGTGGGATTTGCAAGATTCTGAGAGTAACATTCTTCCGGCTTTAAGATTAAGTTACCATTATCTCCCATCACATTTGAAGAGATGTTTTGCTTATTGTTCAATTTTCCCAAAAGATTATGAATTTGAGAAGGAGAACCTGGTTTTGTTGTGGATGGCAGAGGGTTTTCTCCAACAATCCAAAAGACATAGAAGAATTGAAGAAGTTGGCAATGAGTACTTCTGTGAACTGGTATCTAGATCATTTTTCCAGCAACCAAGGCGTGGCAAGTCATGTTTTCTAATGCATCACCTTGTAAATGATTTGGCTCAGTTTGTGTCAGGAACATTTTCTATCAGAATGGAATGTAGCAATTCTAATGAAATCAAAGAAAGAACTCGCCATTTGTCACACATTATTGCAGATAGTTCCTCATACGTAAACCTGAAAGATGTTAGCAAAGCAAATTGCCTACGCACTTTTCTGCAAATAAGACCAGTAGGTACATCCATTGATTTGTTCAACAACATGCCAAATGATCTGTTAACAAAGTTAAGGTCCTTAAGGGTGTTATCTTTGGTAGGAACACATATCTATAGCTTACCTAATTCAGTAGGTGAACTAAAGCATCTCCGCTATCTGGAAGTGGCTGATACTGAGATTGTGAGGTTACCCGAATCCATCTGCAGCTTGTTCAATTTACAAACTCTCAAGCTAGTTGGATGTCACAATCTTATTGAACTGCCAGCAAGTATTCATAAGCTTGTTAATTTGCGCCATTTGGATATTAGAGGAACAAGTTTAAGGTGGATGCCATTGCAAATCAATGAGTTAAACAGCCTCCAAAATTTGAGTGACTTTTTTGTGGGAAAGGGATGTGGATCTTCCCTCGGTGAATTGGGTGAGTTAATATGCTTACATGGAGAATTGTTTATTCATTGCCTAGAACACATTGTTAGTGACAAGGATTGTGAAAAGGCAAAGTTGAAGGAAAAGCATGGTCTTGAAAAGTTGTCTTTGGACTGGTGTAGGAATGGTGAAACTGAGAACTCTCAGAAAGAAAAAACCATACTGAACAGCCTGCAACCACATACAAATTTGAAGAAGCTGGATATCTATGACTATCCAGGTACAGAATTTCCAGAGTGGTTGGGGGATCACTCCTTCTACAATTTGGTGTCCTTAATGCTTAATGGCTGTAAATACTGCTATAGGCTGCCTCCCCTTGGACAACTTCCAATGTTGAAAGAGCTTCAGATCAGTAAATTTGAGGGACTAGTGAGTGTGGGATCTGAGTTTCTTGGAAATAGAACCTCTTATTTAACTAATTGCTTTCCTGCACTAGAAATTCTAAGGATTGAGTCTATGCCATTATGGGAGAAATGGTATCCTAATGCTGAAAATGCAGGAAGTAAAGCTTTCTTTCATCTTAGAGAGATTCATATTGGAAACTGTCCCAAACTGAGGGGGAATTTACCAGATAATCTTCCATCTTTGACATTACTTGTAATCAGAGATTGTAAACGTCTACTTTGTTCACTTCCTAATTCTCCATCTCTGCGCGTGTTGAACATTCAGAATTGTGAGAGTCTAGAATTCAAAGTACACTCACCTCTGTGCCACCAATCACTAACATCATTGTTCTTGCATGGTAGCTGTGACTCACTCGTGTTCTTGCCTTTAGATCTCTTCCCCAATATCAAGTCTTTGGATATATGGGGATGTAAAAATCTTGAAGCACTTACTGTTTCAGAATCAGATGCAACCCGTCCAAATTTGAAGTCCCTCCATTCCTTGCGCATAAGGCACTGTCCAAATTTCACATCATTTCCCAAGGGTGGATTTGCAGCATCAAAGCTCACTTTGTTAACCATCAACTACTGTCAGAAGTTGAATTCTCTGCCTGAACAAATGCATGACCTTATGCCAAGTTTGAAGGAAGTTCAACTGAGGGGATGTCCCAAAATTGAGTCATCAAGTACGAGGCCACTAAGGATCAGGATTTGCAGCAAACACATGGAAGGCAAACAAAACCTCTCTGATCCTCTCTTTGCAAGGTTGAAAGGTCTGGCTACTGATCAAAGCCCCTCATCAAGTTAG 2775 0.3917 MEACDVFGRDNDKESLVDLVLTHNEKIGIIPIVGMGGIGKTTLAQLIYNDQRVQKEFDVKAWIYVSEEFDICKITKTLLEAVTSCSCDVEDLNFLQRDLKMHVMNKKFLFVLDDVWNENYDNWDKFRSPFKHAGEHGSKIIVTTRSGCVASIMQTVSPYNLRELSNEDSWNLFSKHAFDYGDSSLQLHQSLDKVGREIVRKCKGLPLAVKTLAGLLRCKSDRQEWCKVLDSEMWDLQDSESNILPALRLSYHYLPSHLKRCFAYCSIFPKDYEFEKENLVLLWMAEGFLQQSKRHRRIEEVGNEYFCELVSRSFFQQPRRGKSCFLMHHLVNDLAQFVSGTFSIRMECSNSNEIKERTRHLSHIIADSSSYVNLKDVSKANCLRTFLQIRPVGTSIDLFNNMPNDLLTKLRSLRVLSLVGTHIYSLPNSVGELKHLRYLEVADTEIVRLPESICSLFNLQTLKLVGCHNLIELPASIHKLVNLRHLDIRGTSLRWMPLQINELNSLQNLSDFFVGKGCGSSLGELGELICLHGELFIHCLEHIVSDKDCEKAKLKEKHGLEKLSLDWCRNGETENSQKEKTILNSLQPHTNLKKLDIYDYPGTEFPEWLGDHSFYNLVSLMLNGCKYCYRLPPLGQLPMLKELQISKFEGLVSVGSEFLGNRTSYLTNCFPALEILRIESMPLWEKWYPNAENAGSKAFFHLREIHIGNCPKLRGNLPDNLPSLTLLVIRDCKRLLCSLPNSPSLRVLNIQNCESLEFKVHSPLCHQSLTSLFLHGSCDSLVFLPLDLFPNIKSLDIWGCKNLEALTVSESDATRPNLKSLHSLRIRHCPNFTSFPKGGFAASKLTLLTINYCQKLNSLPEQMHDLMPSLKEVQLRGCPKIESSSTRPLRIRICSKHMEGKQNLSDPLFARLKGLATDQSPSSS 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02290 924 FunFam Probable disease resistance protein At1g61300 2 158 - -
Vian3g02290 924 Gene3D Ribonuclease Inhibitor 715 815 IPR032675 -
Vian3g02290 924 Gene3D Ribonuclease Inhibitor 816 903 IPR032675 -
Vian3g02290 924 FunFam Probable disease resistance protein At5g66910 163 250 - -
Vian3g02290 924 PRINTS Disease resistance protein signature 29 44 - -
Vian3g02290 924 PRINTS Disease resistance protein signature 740 756 - -
Vian3g02290 924 PRINTS Disease resistance protein signature 102 116 - -
Vian3g02290 924 PRINTS Disease resistance protein signature 202 216 - -
Vian3g02290 924 PANTHER DISEASE RESISTANCE PROTEIN RP 21 688 IPR044974 GO:0006952
Vian3g02290 924 Pfam NB-ARC domain 21 251 IPR002182 GO:0043531
Vian3g02290 924 Gene3D - 250 337 IPR036388 -
Vian3g02290 924 Gene3D - 163 249 IPR042197 -
Vian3g02290 924 Gene3D Ribonuclease Inhibitor 350 697 IPR032675 -
Vian3g02290 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 265 IPR027417 -
Vian3g02290 924 SUPERFAMILY L domain-like 327 734 - -
Vian3g02290 924 Gene3D - 2 157 IPR027417 -
Vian3g02290 924 SUPERFAMILY RNI-like 668 883 - -
Vian3g02290 924 FunFam Probable disease resistance protein At1g63360 251 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02290 Vian-Chr3 35028424 35031198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02290 27 497 WRKY Transcription Factor Family AT5G45050 23.307 4.02e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02290 - - vum:124831962 1858.19