Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02217 ATGGTGGTGGCGGAGTCTGAGATGAACTCACAAAACGACGCTGAATCTTCGATAGAGTTGGAGCAACTGCACGACGTCAACAAGAATCACCCATTCTCTTCATTGGGAAGAGAAGCTTCTTCCATCTACTCCATCACCCTCGACGAGTTCCAACACACGCTATGGGAGAATGGCAAGAACTTTGGGTCCATGAACATGGACGAGTTTCTCAGCAGCATATGGTGTGCAGAAGAAATTCAAATTTTAAACAACAGCATCAACATTAGCAGCTTCTCACTGAATGAAGCTTCCGCAGAAAAAGGGTTGATAAGGAAGCAACCGAGCCTTCCTCGGCAAGGGTCTCTAACACTTCCTGCACCTTTGTGTAGGAAAACAGTGGACGAGGTTTGGTCTGAGATACACAAAGGACAACAACAACGGCAACCACAGAAAAACAACGACAATAACTGTGGAAGCGTTAATAATGATAACAATGCTCAAAATACCGATTCTGCCAGTCGCCAACCTACCTTTGGAGAGATGACTTTGGAGGACTTCTTGATAAAAGCTGGGATAGTTCGTGAACAGTGTGCCATTGCAACGCCAGTTCCAGCTTCTACAAGTCAAAATCAGCATTTGCAGCAGTATGGCTTCTTTCCTAATAACAACCGTACAATGGAGCCTTCTTTTGTCGGAAGGCAGGTGATGGGGCTTGGTGGCGGCGGTTTCGGCGGTAGTGCTGGTGGGAATGTGGTTAGACCACCTTATCAGGCGGTGACTAAGGGTGGTGGTGGGGGTGGTGCAGTTGGACAGTCTTCTGGGTATCCGGCGGCAGTGCCGTCAGCGGTTTGCTTTGGACCGAGGGCGGTGAATGGTGGCGGTGGTTACGAGGCAGTGAGCAACATGGGAGTGGTGGCGCCGGTGAGTCCGGTTTCGCCGGAGGGGATAGGTACTGGTGAAAATTTTGGTTCCAGATTTGGGATGGACAAAGTTGTGTCAAGAGGGAGAAAGAGGGCGTTTGATGGGCCTGTGGAAAAGGTGGTGGAGAGAAGACAGAGGAGGATGATCAAGAACAGAGAATCAGCAGCCAGATCCAGAGCAAGAAAACTGGCATACACAATTGAATTAGAAGCAGAATTGACCCAGTTGAAAGAAGAGAACGCCGAACTTAAACTATCACTGGCTGATCTTGAAAGGAGAAGAAAGCAACAGCATTTAGAGGAAGGGAATTGGAGAGTTCAAAACAACCTTCAAAAGGCCAAAAATAAATCGAGATCATTGAGAAGGATCATGAGTTGCCCTTTATGA 1287 0.4794 MVVAESEMNSQNDAESSIELEQLHDVNKNHPFSSLGREASSIYSITLDEFQHTLWENGKNFGSMNMDEFLSSIWCAEEIQILNNSINISSFSLNEASAEKGLIRKQPSLPRQGSLTLPAPLCRKTVDEVWSEIHKGQQQRQPQKNNDNNCGSVNNDNNAQNTDSASRQPTFGEMTLEDFLIKAGIVREQCAIATPVPASTSQNQHLQQYGFFPNNNRTMEPSFVGRQVMGLGGGGFGGSAGGNVVRPPYQAVTKGGGGGGAVGQSSGYPAAVPSAVCFGPRAVNGGGGYEAVSNMGVVAPVSPVSPEGIGTGENFGSRFGMDKVVSRGRKRAFDGPVEKVVERRQRRMIKNRESAARSRARKLAYTIELEAELTQLKEENAELKLSLADLERRRKQQHLEEGNWRVQNNLQKAKNKSRSLRRIMSCPL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02217 428 CDD bZIP_plant_BZIP46 343 397 - -
Vian3g02217 428 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 346 361 IPR004827 GO:0003700|GO:0006355
Vian3g02217 428 SMART brlzneu 339 405 IPR004827 GO:0003700|GO:0006355
Vian3g02217 428 SUPERFAMILY Leucine zipper domain 343 393 IPR046347 GO:0003700|GO:0006355
Vian3g02217 428 Coils Coil 366 400 - -
Vian3g02217 428 Gene3D - 341 394 - -
Vian3g02217 428 MobiDBLite consensus disorder prediction 135 171 - -
Vian3g02217 428 MobiDBLite consensus disorder prediction 132 171 - -
Vian3g02217 428 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 341 393 IPR004827 GO:0003700|GO:0006355
Vian3g02217 428 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 37 426 IPR043452 GO:0003700|GO:0045893
Vian3g02217 428 Pfam Basic region leucine zipper 342 392 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02217 Vian-Chr3 33288237 33290667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02217 1 397 bZIP Transcription Factor Family AT2G36270 47.991 4.30e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian3g02217 bZIP_1 3.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02217 K14432 - gmx:100790948 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02488 2 45587027 45589025 Vian3g02217 3 33288237 33290667 PCT