Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02182 ATGGTATCTTTGAAGAAACTAGCGAAGAAAGTGAAGGCTGTCGGTGGCGCTGAGCCAGAGCCTGATACTCTCTACCAAGAATGTTTGCTGAAGGGGTATGAAGAGGAAAAGGAATCTGGGTCTGGCGTAACCCCAACTGGTTTTTTAGCACTTTACGTTGGTGATGAACGGCAGAGATATGTGGTCCCAACCAGCTACCTTTCCCACCCTCTATTCAAGATGCTGCTGGAGAAGGCCTACAATGAATTTGGCTTTGCTCAGAGGAATGGCCTAGTGGTTCCATGCACTGCTTCAACATTTCAAGAGGTGGTGAATGCTATTGAATGCAACAATGGCAAGTTTGACTTAGGAAAACTTTTTGAAGATTTTGCTTAA 375 0.4507 MVSLKKLAKKVKAVGGAEPEPDTLYQECLLKGYEEEKESGSGVTPTGFLALYVGDERQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCTASTFQEVVNAIECNNGKFDLGKLFEDFA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02182 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 34 103 IPR003676 GO:0009733
Vian3g02182 124 Pfam Auxin responsive protein 27 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02182 Vian-Chr3 31851351 31851725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02182 45 110 Calmodulin-binding Proteins AT5G20810 54.545 2.85e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02182 K14488 - gmx:100790208 198.364