Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02176 ATGGATTCTGCTCCCAATCTTTCTCTTCATTCTCAAAACCACACCTCCACTCACTGCCGTGTCAAGGGCTTTCTCGTCTACACTCGCCGCAAACGTTCTCTTCATTCCGCCAATGATGCAGCCAAAAGACTCAAAACTGAAGAAATTAAAACAGAAGAATCTCATGATGAGGACTCCGTGTTCAAGCTCCCCAGAGTGGACTCTCGAGAGGACCCCAATTCTGCCGAGGAATTAATCAAGACTGAATTGAATACTCCACAGAAGAAGATTGTGGTGGTCAGTAAGAAACCCGTCACCGTCAAGGAGCTCTTTGAAACTGGTTTGCTAGAGGGCGTTCCGGTCGTTTACGTCGGTTGCAAGAAGGATTCAACTTCGGAATTGCGGGGTGTAATTACTGATGGTGGGATCTTGTGCTCGTGCCGTCTGTGCAATGGATGTAGGGATGTTTTCCTGCTTCCAATGTGGAAAGAGTGGGCCTTTTGTGTCTATCATGTGTGGAATCAAGAAAATCTGAAAGCAGTTCTATTCATGCTGTTGGCAAAAGAGTCAGTGTCTACTTTAAAAGTTGGAAACAGAAATTCAACAAGTTATAAATTCAAGAATTGTGTGATGCAGTTGTCTCCTAAGAAGATATCATCGGAGGAAGCTGTTTTGGAATCGAGAGGTCCCCTCGGCCAGTATTATTCTCCCGTTCATGTTCTTGTTGTAGTTCTGAATTATGTATTTCTCCTCAAACTAAGAGACACTGGAAGACAAGAACAAAGTTGGTATCAGCGAATACATAAATTGATTTTTGAAGAGGATGGATTGCCTAATGGGGCTGAAGTAGCTTATTATGCACGTGGACAGCACCACATTGTATGTGCATTTATCTGTGATTATGTTTGGAAATGTACAGAATGTGCATCTGTATCAAGCATTCCCCGGGGTGAGTGGTACTGTCAAATTTGTCAACACACATTTCTCAGAGAAAGGCCTGTGTTATACAATGCTGATGCTGTGGCAGCTGGAAGGGTAGAAGGTGTTGATCCCATTGAGGAGATTGCCAAGAGATGCATTCGCATAGTAAAAGACATAGGAGCTGAGATTGGTGGATGTGTTTTATGCAGGAGTTCTGATTTCAGCAGATCAGGATTTGGTCCTCGTACAATTATAATCTGTGATCAGTGTGAAAAGGAATATCATGTTGGTTGCTTGCGGGATCGTAAGATGGCATTTCTGAAGGAGTTACCAGAAGGGGATTGGCTTTGTTGCAACGATTGCACCAGAATACATACTACTTTGGAGAATCTCCTGGTTACGGGGGCTGAGAGACTCCCTGAATCTCTTTTGGATGTTATAAAGAAGAAGCATGTAGAAAGATGTTTAGAACCCCTTAATGAGATTGATGTAAGATGGAAACTTCTTAATGGAAAAGTTGCGTCTCCTGAAACTAGGCCATTGCTTTTGGAGGCAGTGGCCATGTTTAATGAATGCTTTGATCCTATAGTTGATCCAGCTGCTGGACGTGACCTCATTCCTGCCATGGTTTATGGAAGGAATTTGCAGACTCAAGATTTTGGAGGAATGTATTGTGCATTATTGATCGTCAATTCATCGGTGGTATCTGCGGGCATGCTTCGAATTTTTGGTGAGGACATTGCCGAACTCCCCATAGTTGCAACAAGATATAAGAACCGTGGGAAGGGCTACTTCCAAACACTTTTCTCGTGCATTGAGAGGCTGCTGGCTTTCTTGAAAGTGAAAAATCTTGTGCTACCGGCTGCTGAAGAAGCAGAATCTATATGGACAGAAAAATTCGGATTTAGCAAGATGAAACCCGATGAGCTTACCAACTATAGAATGAACTGCCATCAGATCATGGCATTTAAGGGGACTATAATGCTTCATAAAACGGTACCTCGATGTCGTGTCATCAATACTCAATCATGA 1932 0.4301 MDSAPNLSLHSQNHTSTHCRVKGFLVYTRRKRSLHSANDAAKRLKTEEIKTEESHDEDSVFKLPRVDSREDPNSAEELIKTELNTPQKKIVVVSKKPVTVKELFETGLLEGVPVVYVGCKKDSTSELRGVITDGGILCSCRLCNGCRDVFLLPMWKEWAFCVYHVWNQENLKAVLFMLLAKESVSTLKVGNRNSTSYKFKNCVMQLSPKKISSEEAVLESRGPLGQYYSPVHVLVVVLNYVFLLKLRDTGRQEQSWYQRIHKLIFEEDGLPNGAEVAYYARGQHHIVCAFICDYVWKCTECASVSSIPRGEWYCQICQHTFLRERPVLYNADAVAAGRVEGVDPIEEIAKRCIRIVKDIGAEIGGCVLCRSSDFSRSGFGPRTIIICDQCEKEYHVGCLRDRKMAFLKELPEGDWLCCNDCTRIHTTLENLLVTGAERLPESLLDVIKKKHVERCLEPLNEIDVRWKLLNGKVASPETRPLLLEAVAMFNECFDPIVDPAAGRDLIPAMVYGRNLQTQDFGGMYCALLIVNSSVVSAGMLRIFGEDIAELPIVATRYKNRGKGYFQTLFSCIERLLAFLKVKNLVLPAAEEAESIWTEKFGFSKMKPDELTNYRMNCHQIMAFKGTIMLHKTVPRCRVINTQS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02176 643 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 362 424 - -
Vian3g02176 643 SUPERFAMILY FYVE/PHD zinc finger 360 420 IPR011011 -
Vian3g02176 643 SMART PHD_3 365 422 IPR001965 -
Vian3g02176 643 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 364 424 IPR013083 -
Vian3g02176 643 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 521 607 IPR016181 -
Vian3g02176 643 PANTHER AUTOIMMUNE REGULATOR 37 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02176 Vian-Chr3 31730600 31740852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02176 286 640 PHD Transcription Factor Family AT2G36720 53.315 6.08e-138 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02176 - - gmx:100798276 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02176 3 31730600 31740852 Vian3g02176 3 31730600 31740852 ECH