Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02173 ATGCCTTGCTCAATCTCTCTCTCACCCATCTCTCTCTTCTCTCTCCGCACAACCACCAGTACCTCTCCCTCTCTCTATCCTTCTCCCAAACACTATCGCCTCGCCGTCAAATCCTCCGTTAACAAACCCCCCGATGCCAGCACCAAGTCCGGTTCCTGGGTCAGCCCCGACTGGCTCACTTCCCTCACTCGCTCCCTCACCGCCGGGAACGACGACTCCGGCATCCCTGTCGCCACCGCCAAGCTCGATGACGTCTCCGACCTCCTCGGCGGCGCGCTCTTCCTCCCTCTCTTCAAGTGGATGCAGGACTATGGCCCCATTTACCGCCTCGCCGCTGGCCCCAGAAACTTCGTCGTCGTTAGTGACCCCGCCATTGCCAAACACGTGCTCAGGAACTACGGGAAATATTCTAAGGGCCTCGTTGCTGAGGTCTCCGAATTTCTCTTCGGGTCTGGTTTCGCAATTGCCGAAGGCCCGCTCTGGATGGCAAGGCGCAGGGCTGTGGTTCCATCTCTTCATAAACGATATTTGTCTATTATAGTGGATAGGGTATTTTGTAGATGTGCTGAGAGATTAGTGGAGAAGCTACAATCTGATGCACTCAATGGAACTGCTGTTAACATGGAGGAGAAGTTTTCACAGTTGACTCTGGATGTTATTGGTTTATCTGTATTTAACTATAACTTTGACGCACTAAGTGCAGACAGTCCTGTTATTGAGGCTGTTTACACAGCATTGAAAGAGGCAGAGGCTCGATCAACTGATCTTTTACCATATTGGAAGGCAAAATCTGAGGGGGAAAGAATTGATGTTGAGGAATATGTAAATGATACTGACCCTAGTATTCTTCGGTTCTTGCTTGCCAGCAGAGAAGAGGTTTCCAGTGTACAATTAAGGGATGATCTTTTGTCACTTTTAGTTGCTGGTCATGAGACCACTGGTTCAGTGCTGACCTGGACACTTTATCTTCTAAGCAAGGATTCTTCCTCATTGGCAAAAGCACAAGAAGAGGTAGACAGAGTTTTACAGGGAAGGCGTCCTGCCTACGAAGATATTAAAAATCTGAAGTTCTTGACACACTGTATTATTGAGTCACTCCGTCTCTATCCACATCCCCCGTTCTCTCTTTCACCTACATGTGTCACGTGGACGTTTGGCTCCTTTTCTGGGCTTGATTTTTTCTTTACATTGAGGAGTGGAAAGGTTAAAATTGTCTGGCTTGGGCCTTCCCAGCAGTTGGAGTTTAGCCCCAACTTAATCCAGACACAGGTGTTGATAAGAAGAGCTCAAGTTCCTGATGAGCTTCCAGGTTCTTATAAAGTCAATGCTGGTCAAGATATTATGATTTCTGTATACAATATACATCGTTCTTCTGAGGTTTGGGATAGGGCTGAAGAGTTTATGCCAGAAAGATTTGATTTGGATGGTCCGGTGCCAAATGAAACAAATACAGACTTCAGATTCATTCCATTCAGTGGAGGGCCCCGCAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCTATAGTTGCTCTTGCAATCTTTATACAGCACATGAACTTCGAACTGGTTCCTAATCAGAATATCAGTATGACTACAGGAGCAACAATACACACAACAAATGTAAGGTTATATATTCTTGTCTTTGAGATGGATTTCTACAAGGGACTCCTTTTTATGCTTTGTTTTGCAAATCTCAATCTCTCAAGAGGAGAATGA 1719 0.4613 MPCSISLSPISLFSLRTTTSTSPSLYPSPKHYRLAVKSSVNKPPDASTKSGSWVSPDWLTSLTRSLTAGNDDSGIPVATAKLDDVSDLLGGALFLPLFKWMQDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGKYSKGLVAEVSEFLFGSGFAIAEGPLWMARRRAVVPSLHKRYLSIIVDRVFCRCAERLVEKLQSDALNGTAVNMEEKFSQLTLDVIGLSVFNYNFDALSADSPVIEAVYTALKEAEARSTDLLPYWKAKSEGERIDVEEYVNDTDPSILRFLLASREEVSSVQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPAYEDIKNLKFLTHCIIESLRLYPHPPFSLSPTCVTWTFGSFSGLDFFFTLRSGKVKIVWLGPSQQLEFSPNLIQTQVLIRRAQVPDELPGSYKVNAGQDIMISVYNIHRSSEVWDRAEEFMPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFIQHMNFELVPNQNISMTTGATIHTTNVRLYILVFEMDFYKGLLFMLCFANLNLSRGE 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02173 572 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 491 500 IPR017972 GO:0005506|GO:0016705
Vian3g02173 572 PANTHER CYTOCHROME P450 FAMILY 4 425 524 - -
Vian3g02173 572 Gene3D Cytochrome P450 76 550 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 PRINTS P450 superfamily signature 489 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 PRINTS P450 superfamily signature 498 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 Pfam Cytochrome P450 97 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 Pfam Cytochrome P450 426 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 SUPERFAMILY Cytochrome P450 424 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 SUPERFAMILY Cytochrome P450 90 377 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 PRINTS E-class P450 group I signature 488 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 PRINTS E-class P450 group I signature 498 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g02173 572 PRINTS E-class P450 group I signature 450 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02173 Vian-Chr3 31567082 31574203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02173 25 541 Cytochrome P450 AT3G53130 68.761 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02173 K09837 - gmx:100803324 825.854