Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02170 ATGCAGGACGCAACAATGGTGGTGCCTCCATGGTTCGAGCCGCTCCTCACCACATCGTTTTTCAATGTGTGTCGCGTTCATGGAGATGCTGCGAGAAGCGAATGTAACATGTTTTGTTTGGATTGTAACGAGGATGCGTTTTGCTTCTATTGCCGATCCTCGCGACACAAAGATCACCGAGTGATTCAGATAAGGCGATCTTCTTATCACGATGTGGTGAGGGTGTCGGAAATTCAGAAGGTGTTGGACATCAGTGGAGTGCAAACGTATGTGATTAACAGTGCCAGAGTATTGTTTCTGAACGAGAGGCCTCAACCCAAGTCAGGGAAAGGCGTTGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGGTTCTGTTCTTTGGGGTGTAAGCTTGTGGGAATAAAGAGAAATGGGGATGCAAGGTTTGGTGGTTTGGATTCTAAAAACGAGACAGCAACAATGGAGGGCATGTCAAGGAGATTGGTTTCTTCAAGGTATCACCAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACGCCTTCTCCACCTGCTTCAAACGCAAGGCGAAGAAAAGGCATTCCTCACAGGGCACCTTTTGCCTCCTAA 636 0.478 MQDATMVVPPWFEPLLTTSFFNVCRVHGDAARSECNMFCLDCNEDAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRNGDARFGGLDSKNETATMEGMSRRLVSSRYHQEEELREGSQQDMYPATPSPPASNARRRKGIPHRAPFAS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02170 211 Pfam PLATZ transcription factor 65 136 IPR006734 -
Vian3g02170 211 SUPERFAMILY B-box zinc-binding domain 22 66 - -
Vian3g02170 211 MobiDBLite consensus disorder prediction 167 181 - -
Vian3g02170 211 MobiDBLite consensus disorder prediction 158 211 - -
Vian3g02170 211 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02170 Vian-Chr3 31417201 31418496 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vian3g02170 PLATZ 1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02170 - - gmx:100809455 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02422 2 44705095 44706235 Vian3g02170 3 31417201 31418496 PCT