Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02153 ATGGAACTCTCTCTGTTCCACCATCAGCACCATCCTATGATGTTCCTCAATTGCCCCATTAGCTTAACAATTTGTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCAAAAATTCCTGAAAGTGATTATACAACCTTACCCAATGGCTTGAAGTACTATGATTTGAAGGTCGGGAATGGAGCCGAAGCTAAAAAGGGATCTCGTGTTGCAATTCACTATGTGGCCAAATGGAAGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGTGTTGGAGGAGGAACGGCTGACGAAAACATGCTTGAATCATTGCAGCCCTATGGATTTGATGTAGGGCAATCAGAGAGAGGAACAGTCCTTAAAGGGTTGGATTTAGGCGTAGAGGGCATGCGAGTAGGAGGCCAGCGACTATTGATTGTTCCTCCTGAACTTGCCTATGGAAGCAAGGGAGTGCAAGAAATCCCTCCTAATTCAACGATTGAGTTGGACATTGAACTGCTTTCTATCAAACAAAGTCCATTCGGGACTCCTGTAAAGATAGTTGAAGGTTAA 582 0.445 MELSLFHHQHHPMMFLNCPISLTICGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNGAEAKKGSRVAIHYVAKWKGITFMTSRQGMGVGGGTADENMLESLQPYGFDVGQSERGTVLKGLDLGVEGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02153 193 Gene3D - 36 184 IPR046357 GO:0003755
Vian3g02153 193 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 50 187 - -
Vian3g02153 193 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 72 177 IPR001179 GO:0003755
Vian3g02153 193 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 76 180 IPR001179 GO:0003755
Vian3g02153 193 SUPERFAMILY FKBP-like 47 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02153 Vian-Chr3 30991797 30994744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02153 76 180 Calmodulin-binding Proteins AT5G48570 36.449 2.12e-12 63.2