Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02151 ATGGAACCCAATGGGCTAGGCGCGGGAATGTTCTCTGGGTTGGTGGGAGTGGAGAACTCTTTGCCTCCGCAGCAACAGCAAAACCCTCACCATTTGCAAAACCACCCCCAGATGGTTCCCTATGGCCCACACCACGACACTGATCCACATCATCAGCATCATAATCAATCGATCAAACAAGGGTACCCTCAATATTCTTCGGTCAAGACCAAACAACAGCAACAAAGTGCCCTCAGTGACGATGATGATGACACCTCGGACCCCAAGAAGAAGATGTCGCTGTGGCAGAGAATGAAGTGGACTGACACCATGGTGAGGCTTTTGATAATGGCGGTTTATTACATTGGTGATGAGGGTGGCTCAGAAGGGACTGATAAGAAGAAGTCCTCGGGTATGCTGCAGAAGAAAGGGAAGTGGAAGTCGGTGTCGCGGGCTATGATGGAGAAAGGGTTCTATGTTTCTCCTCAACAGTGTGAGGATAAGTTCAATGACTTGAACAAGAGGTATAAGAGGGTGAATGATATTCTCGGGAAGGGAACTGCTTGCAGGGTTGTGGAGAATCAGAGTTTGTTGGAGACGATGGAGTTGTCATCAAAGATGAAAGAGGAGGTTAAGAAGTTGCTCAATTCCAAACATTTGTTCTTCAGGGAAATGTGTGCTTACCATAATAGTTGTGGTCATGTGAATAACAATGCTCCACAGCAAGGAGAGACCGGGGGTGAGGTGTCTCAGTCTCAGGCTCAGGCTCAGGCTCAGGCTCAAGTACAGCCTCAGCAGCAGCAACAGCCTCCGCAGCAGCAACAACAGCAACAGCAACGTTGTTTTCATTCATCAGAGGTGGGGAATTTGGGGGGTTTGAGGATGTTGAAAATGGGAAATGGGGAAGAGAATGATGATGATTCGGATGAGGATGATGAGTCTGAGGATGATTCGGATGAGGAGGAAGATGATTCAGGAGAAGGTGGTTCAAGGGGTCATGTGGGGCATGGACATGAAGATATGGAGGATGATAATGATGGAAGGTCAATGAGGAAGAAGGCAAGGAAAGTGAGGGGAGTTGGTGTGTCAGCAGTGATGATGCAGCAACTGAATGCTGAGGTGAGTGGTGTGTTCCAAGATGGGGGTAGGAGTGCTTGGGAGAAGAAGCAATGGATGAGGAGCAGGATACTGCAGTTGGAGGAGCAGCAATTGAGCTATCAGAGTCAATCATATGAGTTGGAGAAACAAAGGTTGAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGCCAAACTTGAAAATGAACGAAGGAGGCTTGAGAATGATAGAATGGTTTTGCTCATTCGACAGAAGGAGCTTGAGCTGATGAGTCTTCAACACCAACAACAGCAACAACAACATTCTTCTACTTAG 1404 0.4765 MEPNGLGAGMFSGLVGVENSLPPQQQQNPHHLQNHPQMVPYGPHHDTDPHHQHHNQSIKQGYPQYSSVKTKQQQQSALSDDDDDTSDPKKKMSLWQRMKWTDTMVRLLIMAVYYIGDEGGSEGTDKKKSSGMLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLETMELSSKMKEEVKKLLNSKHLFFREMCAYHNSCGHVNNNAPQQGETGGEVSQSQAQAQAQAQVQPQQQQQPPQQQQQQQQRCFHSSEVGNLGGLRMLKMGNGEENDDDSDEDDESEDDSDEEEDDSGEGGSRGHVGHGHEDMEDDNDGRSMRKKARKVRGVGVSAVMMQQLNAEVSGVFQDGGRSAWEKKQWMRSRILQLEEQQLSYQSQSYELEKQRLKWARFSSKKEREMERAKLENERRRLENDRMVLLIRQKELELMSLQHQQQQQQHSST 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02151 467 PANTHER F16F4.11 PROTEIN-RELATED 12 456 - -
Vian3g02151 467 MobiDBLite consensus disorder prediction 230 278 - -
Vian3g02151 467 MobiDBLite consensus disorder prediction 319 344 - -
Vian3g02151 467 MobiDBLite consensus disorder prediction 230 347 - -
Vian3g02151 467 Gene3D - 100 171 - -
Vian3g02151 467 MobiDBLite consensus disorder prediction 1 91 - -
Vian3g02151 467 MobiDBLite consensus disorder prediction 76 91 - -
Vian3g02151 467 Coils Coil 417 446 - -
Vian3g02151 467 MobiDBLite consensus disorder prediction 18 34 - -
Vian3g02151 467 MobiDBLite consensus disorder prediction 56 75 - -
Vian3g02151 467 Pfam Myb/SANT-like DNA-binding domain 97 220 IPR044822 -
Vian3g02151 467 MobiDBLite consensus disorder prediction 296 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02151 Vian-Chr3 30918952 30920355 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vian3g02151 Myb_DNA-bind_4 2.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02151 - - gmx:100816661 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02151 3 30918952 30920355 Vian3g02151 3 30918952 30920355 ECH
Vian2g02434 2 44839010 44840242 Vian3g02151 3 30918952 30920355 PCT