Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02149 ATGGCCTCTTGCGACGACGACGACGACTTCTCTCTCCTCCGTGACGATAACCACCACCTCCACCAGCCTTACGCCCCGCACCACCACTTCTCCCCCTCCGCCGTCGCCGTCGCTCCTGTCCCACCCAAATCCGTTGCTGACGACGCCGACGACTATGGAAACCCCTTCGACGACGACGGTGGCAGCGAAAAGCGGAAGGACCGGGAGGAGATCGGCGAGGGAGCCACGTCGTACGGATTCAACAAGAGATCTAAGGCTCCGCAGTCGAGTGCAGGCAGTGCGGAGTACAGAAAGGACAGGGAGGAGTGGAGCGACACGGCCATCGTGTGCCTCCTCGAGGCTTACACGGAGAAGTTCACACAGCTGAATCGGGGAAACCTCAGAGGAAGGGATTGGGAGGAGGTTGCGTTTGTGGTGAGCGAACGGTGCGAGAACCAATCGAAGAGCGTGGAACAGTGTAAGAACAAGGTAGATAACCTAAAAAAGAGGTACAAATTGGAGCGACAAAGAATGAGCAGTGGCTGCATTTCTACCAGTCACTGGCCTTGGTTCAAACAATTGGAGCAGATCGTCGGGAATTCTCTTCCGGCAAAATTCTCTGATGAGGATAAAGCGGTTGTTTCTGCCGGAACTTCGCCCAGACAATCGAAAAGATATGGAGTAGCAACACCCAGCACAGGTCAAGTGAATAACATTAGGTCAAAAGCACTGACAAACCTTAGATGGCGGAGGGTAGTCTTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATACCTGCAACATGGACCCTAAGGTGGCTATGTTAGTTTCAAGAGAAGTTGCCATAGCTTCCCGCCTTGGTGTTGAGGTGGCGATTGTTGTTGGAGGCTGTAATTTCTTCTCTGGAGATGCATGGGTAAATGCGACAGGTCTAGAAAGATGCACTGCATACCAAGTTGGCATGATGGCAACAGTGATGAATTCAATATTGCTCCAATCGACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAATTGCCATGCAGGAGTTTGCTGAACTATACAATAGGCAGCGGGCTATCAGACATCTTGAGAAAGGAAGAGTTATTATATTTGGTGGCATCAGTTTTGGTGCTGGCAATCCACTTTTCTCAACTGACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAAGCAGTCCTCAAGGGTACTAATGTAGACGGTGTGTATGACTGCAACTCACGGGATAACAATTTCACTTTTGAGCACATATCCTTCAGAGAGCTGGGCTCAAGAGGAATCACTTCTATGGATGCGTCAGCGCTGACTTTATGCAAGGAAAATGCCATTCCTGTGGTGGTTTTTAATCTACTGGAGCCTGGGAACATCTCTAAAGCCTTATGTGGAGAACAAGTTGGCACACTAATTGATCAAACTGGAGCAGTAAGCTAA 1446 0.4965 MASCDDDDDFSLLRDDNHHLHQPYAPHHHFSPSAVAVAPVPPKSVADDADDYGNPFDDDGGSEKRKDREEIGEGATSYGFNKRSKAPQSSAGSAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAFVVSERCENQSKSVEQCKNKVDNLKKRYKLERQRMSSGCISTSHWPWFKQLEQIVGNSLPAKFSDEDKAVVSAGTSPRQSKRYGVATPSTGQVNNIRSKALTNLRWRRVVFKISGAALTGSDTCNMDPKVAMLVSREVAIASRLGVEVAIVVGGCNFFSGDAWVNATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAELYNRQRAIRHLEKGRVIIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELGSRGITSMDASALTLCKENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAVS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02149 481 PANTHER URIDYLATE KINASE 96 480 - -
Vian3g02149 481 MobiDBLite consensus disorder prediction 57 73 - -
Vian3g02149 481 FunFam Aspartate/glutamate/uridylate kinase family protein 103 166 - -
Vian3g02149 481 Pfam Amino acid kinase family 244 454 IPR001048 -
Vian3g02149 481 MobiDBLite consensus disorder prediction 19 98 - -
Vian3g02149 481 FunFam Uridylate kinase isoform A 234 480 - -
Vian3g02149 481 Hamap Uridylate kinase [pyrH]. 240 475 IPR015963 GO:0005737|GO:0006221|GO:0033862
Vian3g02149 481 SUPERFAMILY Carbamate kinase-like 241 474 IPR036393 -
Vian3g02149 481 Coils Coil 143 170 - -
Vian3g02149 481 CDD AAK_UMPK-PyrH-Ec 243 475 IPR015963 GO:0005737|GO:0006221|GO:0033862
Vian3g02149 481 Pfam Myb/SANT-like DNA-binding domain 100 190 IPR044822 -
Vian3g02149 481 Gene3D - 233 480 IPR036393 -
Vian3g02149 481 Gene3D - 103 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02149 Vian-Chr3 30878428 30882374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02149 103 194 Trihelix Transcription Factor Family AT3G14180 38.298 3.99e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vian3g02149 AA_kinase 1.8e-24 No_clan