Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02146 ATGAAGAAAAACACTCAGCTTCTCTATGTCGACGAAGATTACAACGGTGGCATCGTTCGCTACGTCCTCGCCAAGATGGAGAAGGAGAGCACCAACAGTCACGGCCATATCACCTCCCTCGTCGACCTCCGCACCCAGCGCAAACTCAGTCTCGCCACCAAACTCACGACCGCCACACAGAATGCCATGGGACAGGTGTTTGGTGCCGAGTACGTGTCCCTACTCGTGCGCCAGAGCAACCGCGCGACCTTCGATTTCTACACCGAGACCTTGGGGTACAAGATTCATAACGTGGAGGCTAAGCATTATGCAGTCGGAGAGATGCTTATGAGATGA 336 0.5387 MKKNTQLLYVDEDYNGGIVRYVLAKMEKESTNSHGHITSLVDLRTQRKLSLATKLTTATQNAMGQVFGAEYVSLLVRQSNRATFDFYTETLGYKIHNVEAKHYAVGEMLMR 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02146 111 Gene3D - 1 111 - -
Vian3g02146 111 Pfam Acetyltransferase (GNAT) family 8 93 IPR000182 GO:0016747
Vian3g02146 111 PANTHER N-TERMINAL ACETYLTRANSFERASE 5 107 IPR045047 GO:0004596|GO:0006474|GO:0031415
Vian3g02146 111 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 104 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02146 Vian-Chr3 30831628 30834302 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian3g02146 Acetyltransf_1 0.00026 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02146 K20791 - gmx:100800073 149.058