Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02145 ATGGCTTCTTGCATGTGGCTCAAGAGTGCCTGTGGTGGTGGCAGTGGGAAGAAGCCGACGCCGCGGGACGTGCCGCCGGGGCACTTGGCGGTGATGGTGGGAGAAGAGGCAAAGAGAAGGTTTGTGATAAGGGCTGATTACCTTAACCATCCCTTGCTTCAAAAACTTTTAGACAATTATGAAGGTTGTGGCTTCAACAAAAGTGGCCCTCTTGCTATACCTTGTGATGAGTACCTTTTCCAAGATATTATCCAGGCCCTTCGAGATGGATCATCCTCTCCTCATGGGCCCCTCAAGAAGCTCCATTTCAAGGACTCTGTGCCCTTACTTCAGGACAATGATGGCAAAGGGAGCACCAACAACAACTAA 369 0.5041 MASCMWLKSACGGGSGKKPTPRDVPPGHLAVMVGEEAKRRFVIRADYLNHPLLQKLLDNYEGCGFNKSGPLAIPCDEYLFQDIIQALRDGSSSPHGPLKKLHFKDSVPLLQDNDGKGSTNNN 122
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02145 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 83 IPR003676 GO:0009733
Vian3g02145 122 Pfam Auxin responsive protein 18 87 IPR003676 GO:0009733
Vian3g02145 122 MobiDBLite consensus disorder prediction 91 122 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian3g02145 Vian-Chr3 30824343 30824711 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02145 6 96 Calmodulin-binding Proteins AT4G34750 53.763 8.24e-24 87.8
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02145 3 30824343 30824711 Vian3g02145 3 30824343 30824711 ECH