Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02139 ATGTGTCTTCCACAAGTTTCTTTGAAGAATCGAGATGATGTTGGCTACAATCAACTCCTCAAGTTTTGGTGTGAGCTGTCACCACAAGCTCGGTTGGAGCTCTTGAGGATAGACAAACAAACCCTTTTTGAGCATGCACGAAAAAACATGTACTGCTCCAGGTGCAATGGGTTACTTCTTGAAGGATTTCTGCAGATTGTTACATATGGGAAATCTTTGCAACAAGAGGGAGCAGTCGTTCATTTTCCTTGTAGCAGAGCTGGAGGTTTGAAAAATCAAAATAACAGTGGATCATCCATCTGTAATGTGGTCCAGGATGAAATCCAAGATCCAAGTGTCCATCCTTGGGGTGGTTTGACCACAACGCGTGAGGGTGCACTAACACTTCTGGATTGCTACTTGTATTCAAAGTCTCTGAAAGGACTGCAAATTGGCAGGGATATTACGCATGCCTTTGATCACCATCTCCTCAACAGAAACGCCTTTAGAGGCCAAGAAGTCGAATTTGGGGACACGCGTTCGGGTGGGGTCGCGATTCTAGATTCTCTGCTCAAAGTAAACAAACAGAGCCTAGGTTCTCTGCTTCTCATTCTGAAACAAGGAGGCTACAATTCGAGATTCGGCTCCGTTAGGGTTCTGCAGTTCATCGTCGTGAACGCCGAGTCAAAGATTTTAGTAGCCGAGAAGGAAGGAGTGGTTACAGAATTGCTGAAGTCGGTGATGCCAAATAATGATCCGGCACTGATCGAGGCCGCGCTGGTGAGTTTCGGTGCGGTGAGGGCATTGTCGAGACTGTTAGCAGAGGTAGAGCTGGGAGCTGCGACGGTGGAGAAGGTGCTGAAGCTGGTGGAGGCGGTGTCTTCGACAAGGGAGGTGCGGAAGGAGATATGCGAGGACGCGACGTGCATGACGACAATGTTGAGGAAGGTTCTGAAGGTGTGTGGCGACGGAGCATACTGTTAG 963 0.4839 MCLPQVSLKNRDDVGYNQLLKFWCELSPQARLELLRIDKQTLFEHARKNMYCSRCNGLLLEGFLQIVTYGKSLQQEGAVVHFPCSRAGGLKNQNNSGSSICNVVQDEIQDPSVHPWGGLTTTREGALTLLDCYLYSKSLKGLQIGRDITHAFDHHLLNRNAFRGQEVEFGDTRSGGVAILDSLLKVNKQSLGSLLLILKQGGYNSRFGSVRVLQFIVVNAESKILVAEKEGVVTELLKSVMPNNDPALIEAALVSFGAVRALSRLLAEVELGAATVEKVLKLVEAVSSTREVRKEICEDATCMTTMLRKVLKVCGDGAYC 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02139 320 PANTHER OS10G0105400 PROTEIN 8 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02139 Vian-Chr3 30659326 30670493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02139 176 313 U-box Gene Family AT3G18710 36.994 6.19e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02139 - - var:108336443 283.108