Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02125 ATGAAGACGATAATAGAATGCTGTGTCTCTGCAAGTGCCACACGTGTCTGTGGCCTTTTGCCATACAGAAATTATTCATGTAATAGCATGCTTGCAACTTGTTCAGCATCATCCTCAACAACAAGAAGAACTTTATCTCTTTCTCTCATCTCCACCACTTTCTCTGCATTCATCTTCTCACTTTCTCCTCCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCAAAATTACCCTTTTCAAAGTTCTTTGAGATCCCTGATTCCGGTGGAGTTAAGGCTTTGGACCTCCTTGATGGTTCAGGTGAAGTTCCCTCAGATGGGGACCAGGTTGCAATTCACTACTATGGCAGGCTGGCAGCAAAACAGGGATGGCGTTTTGACTCAACCTATGACCACAAAGATGACAATGGCGAACCCAATCCATTTGTCTTTGTCCTTGGCTCTGGCAAGGTTATAGCTGGAATTGATGTGGCAGTGAGATCGATGAAAGTAGGAGGTATTCGTAGAGTCATCATACCTCCATCACTTGGGTATCAAAACACATCACAAGAGCCAATCCCACCGAACTTCTTTGACAGGCAGAGGTTGTTCACTACCATTTTTAATCCAACTCGCCGTGCAAATGGAGAAGGCTCCACTTTAGGAACAGTTATATTTGATATTGAGCTGGTTAGCGTGAGGCATCCGTGA 690 0.4406 MKTIIECCVSASATRVCGLLPYRNYSCNSMLATCSASSSTTRRTLSLSLISTTFSAFIFSLSPPSSSSSSSSSSSKLPFSKFFEIPDSGGVKALDLLDGSGEVPSDGDQVAIHYYGRLAAKQGWRFDSTYDHKDDNGEPNPFVFVLGSGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNFFDRQRLFTTIFNPTRRANGEGSTLGTVIFDIELVSVRHP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02125 229 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 103 224 IPR001179 GO:0003755
Vian3g02125 229 Gene3D - 71 226 IPR046357 GO:0003755
Vian3g02125 229 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 107 227 IPR001179 GO:0003755
Vian3g02125 229 SUPERFAMILY FKBP-like 88 227 - -
Vian3g02125 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 18 228 IPR044197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02125 Vian-Chr3 30218803 30221054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02125 67 227 Calmodulin-binding Proteins AT5G48570 31.481 5.10e-14 68.9