Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02113 ATGGCCGAGAAGCACTTGCGGGACTTGCTTCTGGAGGACCAAGAGCCCTTCCTTCTCAAACACTACATTTCGGAACGACGTTCCCTCCTCAAAACACCTTCCCCAAACACAGCCATAACCAAAAACACCTCAAACTCAAACTTCCCACTTAACAAATGCCTCCTCTCCTTCCACAACGCTACCAAATCTCCACTCTTGGAATTCGCGCCGCTCACCAAGAAGCACAGTCCCCTCAGACCCTCCAACGCCAAAACCGCCACGCTCCTCCTTGAAGCCGCCCTCAGAATCCACAAACACGCCAAACCGAAGCCAAACAGGGCCTTGGGCCTCTTCGGCTCGCTCTTCAAAAAACTCAGGAGCCAACGGAAGAGGGGACAGATAAACGATGATGTTGTTGGCGTTGGGTTGGTGGGATCCTGCGAGGGCAGACTCAGCAGCAGTGGCTTGTGGTCGGAGAGCGAGAGCAACGAGGATAAGTCTTTGGACTTGAAAACTTGTAGTAGTGACCACTCCTTCGATGACTCCGTCGAACAAGAGATTCAGTTCCTCAACTCTCATGATCTCTTCTTCTGCCAAACCCCTTTCCGTTTCTCACTCCGGCAGATCCCCGACTACTCCCCCGGCCGCACGCCGGAATTCTCTTCGCCGCTCGCCTCTCCCCGTCGCCACCCAACTCAGGACAATGAAGTTAGTGGTGGTGATGGCGTCAACAAATTTCAATCTGGCGAAGAAGAGGAAGATAAAGAACAATGCAGTCCAGTGTCTGTTTTAGACCCACCCTTCGATGACGATGACAACGACCATGGAGAAGATGGCTTTGATTTGGACTGTAACTATGCCAATGTTCAAAGAACTACGCAGAATCTACTAGACAGGCTCCGTAGATTTGAGAAACTTGCAGAGCTAGATCCAGTGGAGCTTGAGAAGAGGATGTTAGACCAAGAAGATGAAAAATTTATGGAAGAGGATGATGATTACGATGAGAGCGAAAGAAAATGTGGTGAAGAAAATGTGGTTGAAATCCTGAGCCATTCAAGAGTTGATGAGAAGCAGGAAGCAGCTGAGGACCTTAAGAGACTGGTTTATGATATGATCTTGGAGGAAGAGACAGAAGTGAGTTGCTCAGAAGGGAGGAACACAGTGGTGATGAGAAGGGTTTGCAGGAGGCTGGAGTTATGGAAGGAAGTGGAGTGCAACACCATTGATATGATGATTGAAGAGGATTTCTGCAGAGAAGAAGGTAGTTGGAAGAAAAATGGTGAGCACAGAGGGGAGCTAGTTCAGGAAGTTGAGCTTGCAATCTTTTTCTATCTAGTGGAGGAACTTTCAGAGGAATTAGTATGTTGTTAG 1350 0.4874 MAEKHLRDLLLEDQEPFLLKHYISERRSLLKTPSPNTAITKNTSNSNFPLNKCLLSFHNATKSPLLEFAPLTKKHSPLRPSNAKTATLLLEAALRIHKHAKPKPNRALGLFGSLFKKLRSQRKRGQINDDVVGVGLVGSCEGRLSSSGLWSESESNEDKSLDLKTCSSDHSFDDSVEQEIQFLNSHDLFFCQTPFRFSLRQIPDYSPGRTPEFSSPLASPRRHPTQDNEVSGGDGVNKFQSGEEEEDKEQCSPVSVLDPPFDDDDNDHGEDGFDLDCNYANVQRTTQNLLDRLRRFEKLAELDPVELEKRMLDQEDEKFMEEDDDYDESERKCGEENVVEILSHSRVDEKQEAAEDLKRLVYDMILEEETEVSCSEGRNTVVMRRVCRRLELWKEVECNTIDMMIEEDFCREEGSWKKNGEHRGELVQEVELAIFFYLVEELSEELVCC 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02113 449 PANTHER OS04G0572500 PROTEIN 1 446 - -
Vian3g02113 449 Coils Coil 312 332 - -
Vian3g02113 449 MobiDBLite consensus disorder prediction 219 235 - -
Vian3g02113 449 MobiDBLite consensus disorder prediction 206 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02113 Vian-Chr3 29767032 29770426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02113 3 447 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 31.250 1.09e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02113 - - vra:106769918 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02113 3 29767032 29770426 Vian3g02113 3 29767032 29770426 ECH
Vian2g02464 2 45202223 45204768 Vian3g02113 3 29767032 29770426 PCT