Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02101 ATGGGGAGGAAGGGAAGTTGGTTTTCTACTGTGAAGAAAGCTCTGAGCCCTGAATCAAAGGAGAGGAACTATCAGAAAACAAGTAGACCAAAGAAGAAATGGTTTGGAAAACAAAAGTTGCAGACTTCAGCGTCACAATCCGAAACTGATAAAACACCTCCTCTTCCTCCACCCGAGGTTATTTTACCTCACTCTGAGATTGAAACCAGTCATGATGACGTCAAAGTTGAAACTGCAGTTGTTGCCGAGGAACCTGTTCCTGCTGTTCAGACAGAACCTGTGGATGTCCAAGCCACTACAATTGTTCAGTTACACAGTAAACCAACAGAAGAAGTGGCAGCAATAAGGATTCAGAAAGCTTTTCGGGGATACTTGGCAAGAAGGGCATTGCGGGCTTTGAGGGGACTGGTGAGGTTGAGATCACTCATGGAAGGGCCAGTGGTGAAACGTCAAGCCATTAGTACCCTCCGTTCTATGCAGACTTTTGCACATTTGCAAACTCAGATTCGTTATAGGAGGCTCAGGATGTTGGAGGAGAATCAAGCTCTACAGAAACAGCTCTTACAGAAACATGCAAAAGAGTTAGAGAGCATGAGGCTTGGTGAGGAATGGGATGACAGTGTACAATCGAAAGAACAGGTTGAAGCCAAGTTACTGAGCAAGTATGAAGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGCAAAACTGGAAGAATTCATCAAGATCCATAAACCCAATGTTCATGGATCCAACCAATCCAACCTGGGGTTGGAGTTGGTTGGAGCGATGGACGGCAGCCCGGCCCTGGGAGAGCCCTAGCTTGGTGGAGAAAGAGAAGAATGACAATAAATCTATTAGAAGTTCTGGCCGTGGCATTACCAGTGCTGAAATCAGCAAATCATTTGCTAAGTTTCAGCTCAATTCTGAGAAGTATTCTCCAACAGCGAGCCAAAATCCAGGCTCACCTAACGTTGAGTCACATTCCCAGCAATCGCATTCAAATCCTCCCAAGTCAGCTTCTCCAGCAGCTGCTAAGAAGCTGAAGAAAGTGAGTCCAAAGGACATCATTGCTATAGATGATGAGACCAAAAGTGTGATGAGTGTGCAGTCAGAGCGGGCAAGGAGGCACTCCATTGGTGGATCAACAGTGGGAGATGATGAAAGCCTTGCAAGCTCCCCAGCAATTCCAAGTTACATGGTGCCAACTAAATCTGCCAAAGCCAAGTCCAGAATGCAAAGTCCACTAGCTGCAGAAAATGTGACCCCAAATAAAGGGTCCCCTGCTGGGACTGCAAAAAAACGTCTTAGTTTCCCTGCTTCACCTGCTAGACCAAGAAGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTCAATGCTGAAATCGCTGTGGGAAATGGTGTGTCTGGCTGA 1428 0.4622 MGRKGSWFSTVKKALSPESKERNYQKTSRPKKKWFGKQKLQTSASQSETDKTPPLPPPEVILPHSEIETSHDDVKVETAVVAEEPVPAVQTEPVDVQATTIVQLHSKPTEEVAAIRIQKAFRGYLARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTFAHLQTQIRYRRLRMLEENQALQKQLLQKHAKELESMRLGEEWDDSVQSKEQVEAKLLSKYEAAMRRERAMAYSFSHQQNWKNSSRSINPMFMDPTNPTWGWSWLERWTAARPWESPSLVEKEKNDNKSIRSSGRGITSAEISKSFAKFQLNSEKYSPTASQNPGSPNVESHSQQSHSNPPKSASPAAAKKLKKVSPKDIIAIDDETKSVMSVQSERARRHSIGGSTVGDDESLASSPAIPSYMVPTKSAKAKSRMQSPLAAENVTPNKGSPAGTAKKRLSFPASPARPRRHSGPPKVESSFNAEIAVGNGVSG 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02101 475 Gene3D iswi atpase 107 134 - -
Vian3g02101 475 MobiDBLite consensus disorder prediction 1 59 - -
Vian3g02101 475 MobiDBLite consensus disorder prediction 315 475 - -
Vian3g02101 475 Pfam IQ calmodulin-binding motif 113 131 IPR000048 GO:0005515
Vian3g02101 475 PANTHER IQ-DOMAIN 5-RELATED 1 456 - -
Vian3g02101 475 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Vian3g02101 475 MobiDBLite consensus disorder prediction 315 344 - -
Vian3g02101 475 MobiDBLite consensus disorder prediction 412 432 - -
Vian3g02101 475 MobiDBLite consensus disorder prediction 353 376 - -
Vian3g02101 475 SMART iq_5 109 131 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02101 Vian-Chr3 28901888 28904294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02101 1 473 IQD Protein Family AT5G03040 50.000 1.34e-141 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02101 - - vun:114191598 779.63