Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02096 ATGAACGTCACCTACTCCACCAACGTGTTGCTGCTTCCAAAACGTGACACCACTATCCTTCTTCTAAAGGAGATTGGAAGTGCTTCCAACTTAGACCATGCAGTTGTGTGCTCCCCCTTCGTTCTCCGCGCAGGACCCATGGCTTCCTCAAGCGGAACATGTTCGGGTTCATCCTCTCTGCTTCAGAACTCGGGTTCTGAGGAGGACTTGCAAGCGGTAATGGATCAGAGAAAGAGGAAGAGAATGACATCGAATCACGAATCTGCACGGCGATCTCGCATGAGGAAGCAGAAGCACTTGGACGATCTGGTTACCCAAGTGGCTCAACTGAGAAAGGAGAATCAGCAGATACTCACCACCGTCAACATCACCACGCAACAGTTCTTGAGCGTTGAGGCTGAGAACTCGGTGCTCCGGGCTCAGGTGGGTGAGCTGAGCCATCGGTTAGAGTCTTTGAACGAGATCATCGAACTCTGGTTGTGTGTGAGAAGGAGAGGGGAAGATGAAGTGGGAATCATAATGAGTTTTCCCACTGTGTCGTTTCCCTAA 549 0.5082 MNVTYSTNVLLLPKRDTTILLLKEIGSASNLDHAVVCSPFVLRAGPMASSSGTCSGSSSLLQNSGSEEDLQAVMDQRKRKRMTSNHESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEIIELWLCVRRRGEDEVGIIMSFPTVSFP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02096 182 MobiDBLite consensus disorder prediction 75 96 - -
Vian3g02096 182 Pfam bZIP transcription factor 77 121 IPR004827 GO:0003700|GO:0006355
Vian3g02096 182 SUPERFAMILY Leucine zipper domain 77 129 IPR046347 GO:0003700|GO:0006355
Vian3g02096 182 CDD bZIP_plant_GBF1 78 128 IPR045314 GO:0003700|GO:0006355
Vian3g02096 182 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 75 138 IPR004827 GO:0003700|GO:0006355
Vian3g02096 182 PANTHER BZIP TRANSCRIPTION FACTOR 44 49 159 - -
Vian3g02096 182 SMART brlzneu 73 137 IPR004827 GO:0003700|GO:0006355
Vian3g02096 182 Coils Coil 93 120 - -
Vian3g02096 182 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Vian3g02096 182 FunFam BZIP transcription factor 75 127 - -
Vian3g02096 182 Gene3D - 75 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02096 Vian-Chr3 28276615 28278306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02096 71 158 bZIP Transcription Factor Family AT4G34590 69.318 8.69e-38 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian3g02096 bZIP_1 1.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02096 K25786 - gmx:100101862 182.57