Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02074 ATGGCAACTCTTAGCGTGCAAGCTGTTCGTCCTCCTCCATTAACATCCACCTCCGACCCACCTCTTTTTGATGGCACCACCAGGTTGTACATCAGTTATTCTTGCCCCTATGCACAGCGTGTATGGATAACTAGGAACTACAAGAGACTACAAGACAAGATCAAATTGGTTCCTATTGATCTTCAAGATAGGCCAGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCATTGGAGCACAATGGCAAGGTTTTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGCCAACTTTGAAGGGACACCTTTGTTTCCTGGTGATCCTGCTAAGAAAGAGTTTGGTGAACAACTATTATCCCATGTTGATACATTCAACAATGACGCGTCCTCTTCATTGAAAGGGGGTGTTGTACAGCAAGCTAGTTCTGCCTTTGATTACTTGGAGAATGCTCTTGGTAAATTTGACGATGGGCCGTTCTTTCTTGGTCAATTCAGTTTGGCTGTGATTACTAATGCTTGTCGTGATGCATCTAATGTGGATATTGCATACATTCCATTTGTTGAAAGATTCCAACCTGTCTCTGTTGACGTGTTCAAACATGACATCACCGAAGGAAGGCCAAAACTTGCAACGTGGATTGAGGAGGTTAACAAGATTGATGCTTATACAGAGACAAAATTAGAACCCCAGGAAATCGTTGATAGATTCAAGAAACGTTATCTGTATCAACAGTGA 747 0.419 MATLSVQAVRPPPLTSTSDPPLFDGTTRLYISYSCPYAQRVWITRNYKRLQDKIKLVPIDLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGTPLFPGDPAKKEFGEQLLSHVDTFNNDASSSLKGGVVQQASSAFDYLENALGKFDDGPFFLGQFSLAVITNACRDASNVDIAYIPFVERFQPVSVDVFKHDITEGRPKLATWIEEVNKIDAYTETKLEPQEIVDRFKKRYLYQQ 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02074 248 MobiDBLite consensus disorder prediction 1 20 - -
Vian3g02074 248 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
Vian3g02074 248 FunFam Lambda class glutathione S-transferase 104 247 - -
Vian3g02074 248 Gene3D Glutaredoxin 1 103 - -
Vian3g02074 248 CDD GST_C_Lambda 111 241 - -
Vian3g02074 248 SUPERFAMILY GST C-terminal domain-like 102 243 IPR036282 -
Vian3g02074 248 SUPERFAMILY Thioredoxin-like 15 107 IPR036249 -
Vian3g02074 248 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 244 IPR044629 GO:0004364
Vian3g02074 248 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Vian3g02074 248 Gene3D - 104 247 - -
Vian3g02074 248 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02074 Vian-Chr3 26983941 26986149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02074 10 245 Glutathione S-transferase Gene Family AT5G02790 64.557 3.02e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02074 K00799 - gmx:100775492 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02321 2 43577683 43584147 Vian3g02074 3 26983941 26986149 ECH
Vian3g02074 3 26983941 26986149 Vian3g02074 3 26983941 26986149 ECH
Vian2g02321 2 43577683 43584147 Vian3g02074 3 26983941 26986149 PCT