Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02057 ATGGCAGTTTCAGGGGCAACATACATGTTTGGTTTGTACTCCAACGAGGTAAAAACCTCGTTGGGGTATGACCAATCCACGCTCAACTTGATAAGCTTCTTCAAGGACCTTGGTGCCAACCTTGGAATTTTCTCTGGGTTGATCAATGAGGTAAGCCCCCCTTGGGTTATACTAGCCATGGGAGCCACTATGAACTTTGTGGGCTACTTCATGATATGGCTCTCTGTCACTTCACGGATTGCTAAACCCCAACTGTGGCAAATGTGTCTCTACTTTTACATTGGTGCTAATTCTCAGTCCTTCGCTAACACTGGTGCTTTGGTGAACTGTGTCCAAAGCTTCCCAAGAAGCCGTGGAAGTGTGATTGGTCTTCTAAAGGGTTATGTAGGTCTAAGTGGAGCTATTTTCACTCAGCTATACCATGCCTTATATGGTGACAACTCCAAAACTCTTATATTCCTCATTGGGTGGCTTCCTGCTGCTGTTTCCTTCATTTTCCTTCCAACAGTTAGGGTGTTGAGTATAACCCCACAACCCAGAGAGATCAAGGTTTTTTACCAACTTCTTTATATTTCACTTGGGGTTGCAGGGTTTCTCATGGTGTTGATAATTATACAAAACAGGTTGAGTTTCACAAGGGTTGAGTACATAGTGGATGGCATGGTGGTTCTTTTCTTGCTTCTTCTCCCACTTGGTATTGTGTTCAAAGAAGAGTTCAGACTTTGGAAGAACCAGAGCCAGAACCAGAACCAAACCGTCCCTGATCATGCAGATGCTGTTGCTGCTGCTTCTGCCTCGGTTATTGAATTGCCACAGCCAGAAGAAGCACATGCTGCTGCCTCTTCTCATCTGGAAGGGAAAAGCAGCTCATGTTTAAAGAACGTTTTCAAACCTCCAAAAAGGGGTGAGGACTACACCATCTTCCAAGCTATTTTCAGCATTGACATGTTGATTCTGTTCATTGCATCAGTGTTTGGTGTGGGAGGAACATTGACGGCTCTTGACAATCTGGGACAGATTGGAAAGTCATTGGGATACCCGAAAAAGAGCCTCACAACTTTTGTGTCTCTTGTGAGTATATGGAATTATCTAGGAAGAGCATCTTCTGGGTTTGCCTCAGAATTTTTGTTAGCCAAATACAAATTCCCTCGTCCCTTGCTCCTCACTCTGGTCATGCTTCTCTCCTGTGTTGGCCATATTCTAATCGCTTTTGGTATCCCAAACTCACTTTATTTCTCTTCAGTGATTATTGGGTATTGCTTTGGGGCCATGTGGCCCTTAATGTTTGCCATCATATCTGAAATATTCGGCCTCAAATACTACTCAACTTTATACAATTTAGGTGCTGTGGCAAGCCCTGTTGGAGCTTACATTCTGAATGTGAAAGTCACTGGTTTTTTGTATGATAAAGAGGCTTTGAAGCAGTTGAAGATGAAGGGACTCACAAGGCAAAAGGGAAAGGACTTAACTTGCTTGGGAGTTCAATGCTATAAGATGCCTTTCATCATAATCACTGCTTCAACCTTGGTTGGATCCTTTGTTTCCTTCATTCTAGTCTTAAGGACCAGAAAATTTTACAAAGGTGACATTTATCAAAAGTTCAGAGTTGAACCAGACACACCACAGAATCTTCCAACTTTTGCCACCACCACCACCACAAACTTCTCTCAAGAACCAGATAAAATCAACACCAAATAA 1698 0.4293 MAVSGATYMFGLYSNEVKTSLGYDQSTLNLISFFKDLGANLGIFSGLINEVSPPWVILAMGATMNFVGYFMIWLSVTSRIAKPQLWQMCLYFYIGANSQSFANTGALVNCVQSFPRSRGSVIGLLKGYVGLSGAIFTQLYHALYGDNSKTLIFLIGWLPAAVSFIFLPTVRVLSITPQPREIKVFYQLLYISLGVAGFLMVLIIIQNRLSFTRVEYIVDGMVVLFLLLLPLGIVFKEEFRLWKNQSQNQNQTVPDHADAVAAASASVIELPQPEEAHAAASSHLEGKSSSCLKNVFKPPKRGEDYTIFQAIFSIDMLILFIASVFGVGGTLTALDNLGQIGKSLGYPKKSLTTFVSLVSIWNYLGRASSGFASEFLLAKYKFPRPLLLTLVMLLSCVGHILIAFGIPNSLYFSSVIIGYCFGAMWPLMFAIISEIFGLKYYSTLYNLGAVASPVGAYILNVKVTGFLYDKEALKQLKMKGLTRQKGKDLTCLGVQCYKMPFIIITASTLVGSFVSFILVLRTRKFYKGDIYQKFRVEPDTPQNLPTFATTTTTNFSQEPDKINTK 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02057 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 531 - -
Vian3g02057 565 CDD MFS_Mch1p_like 1 511 - -
Vian3g02057 565 Gene3D MFS general substrate transporter like domains 312 525 IPR036259 -
Vian3g02057 565 SUPERFAMILY MFS general substrate transporter 4 527 IPR036259 -
Vian3g02057 565 Pfam Nodulin-like 1 234 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02057 Vian-Chr3 26372189 26373886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g02057 1 535 Nodulin-like Gene Family AT2G39210 61.439 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02057 - - gmx:100814000 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02057 3 26372189 26373886 Vian3g00235 3 2068084 2069895 ECH
Vian3g02057 3 26372189 26373886 Vian3g02057 3 26372189 26373886 ECH
Vian2g02392 2 44382609 44384354 Vian3g02057 3 26372189 26373886 PCT