Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01998 ATGATTCCCTTTTCCAGCATCCTGGGGTACGAAAAGTGTGACAGATACTTAATTTTTAGTGGAGAATCTGCCCTTGGGGATGGTTTTCGAGCATTTTTGTATTTTCTTGGCCTTGCTTACTGCTTTATCGGATTGTCGGCTATAACCGCTCGCTTCTTTCAATCGATGGAAAATGTGGTCAAGCACACAAGGAAGGTAGTGGAGGTAGATCCTGTTACTAAAACTGAAACCATTAGACATGAAAAAGTTTGGAATTACACTGTTGCGGATATTAGCCTCTTGGCCTTTGGGACTAGCTTTCCCCAGATATCATTAGCCACCATTGATGCTATACAGAACATGGGGAAGCTCTATGCTGGAGGTTTGGGGCCCGGAACACTTGTTGGTTCTGCTGCATTTGATCTTTTCCCCATCCACGCCATTTGTGTAGTAGTTCCAAAAGCAGGAGAGCTGAAGAAGATTGCTGATCTAGGGGTATGGCTGGTGGAGCTGTTTTGGTCATTTTGGGCTTACATTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTTGTGACTCTGTGGGAGGCCTTGTTGACAGTACTACAATATGGATTACTATTGATCCATGCTTATGCTCAAGATAAACGTTGGCCCTATATTTCTCTACCCATTGCAAGAGATGAGAGGCCAGAGGATTGGGTACCAGAGGAGACTCCTTATTTTCAACAGGAAGTCTATCAGAAGATGAATTCCTCTGAGATAAAGCATGTTAGTGATGAAAATCGCAACACTGTTGATATTTTTTCCATTCATTCAGAAAACCCCACTGATCCATTGTGTGTCACAGTACCTCAAACAGATGATGAGGCTGAAATTTTGGACAAAGCTAAGGAAACAATGTTGGAGGATACCCACTTGCTTACAATTTGGAGACAGCAATTTGTGGATGCACTGAGGTTGAAGAACCCAGAAGCAAAAAAATTAAAAAATACGTATCTCCTCCTAGCTCGAATTTTCTGGCAATTGCTGCTTTTACCATGGAGATTTCTTTTTGCTTTTGTTCCTCCTTGCCAAATTGCTCATGGATGGATCTCCTTCATTTGCTCCCTGCTTTTCATCAGCGGGATAGCTTACATTGTGACTAAGATCACAGAACTTATAAGTTGTGTTACAGGAATAAATGGTTACGTGATAGCATTTACAGCCCTAGCCAGTGGAACCTCGTGGCCTGATCTAGTGGCAAGCAAGATTGCCGCTGAACGTCAAAAAACTGCTGATTCTGCAATTGCAAATATCACTTGCAGCAACTCAGTGAATATATATGTTGGAATTGGTGTTCCATGGCTTATTGATACTTTGTACAACTTCATAGCATATCGAGAACCTCTCAGAATCCAAAGTGCAGGGGGATTAAGCTTTTCACTGATTGTTTTCTTTTGCACTTCTGTTGGGTGTATATCAGTTTTGGTTTTCAGGCGTATAATTTTTGGAGCAGAGCTAGGAGGGCCTAGGCTCTGGGCATGGATTACGTGTGCTTTCTTCATGTTGTTGTGGATTATCTTTGTTGTACTATCTTCACTCAAGGTTTCTGGATTCATTTAG 1587 0.4184 MIPFSSILGYEKCDRYLIFSGESALGDGFRAFLYFLGLAYCFIGLSAITARFFQSMENVVKHTRKVVEVDPVTKTETIRHEKVWNYTVADISLLAFGTSFPQISLATIDAIQNMGKLYAGGLGPGTLVGSAAFDLFPIHAICVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPEDWVPEETPYFQQEVYQKMNSSEIKHVSDENRNTVDIFSIHSENPTDPLCVTVPQTDDEAEILDKAKETMLEDTHLLTIWRQQFVDALRLKNPEAKKLKNTYLLLARIFWQLLLLPWRFLFAFVPPCQIAHGWISFICSLLFISGIAYIVTKITELISCVTGINGYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQSAGGLSFSLIVFFCTSVGCISVLVFRRIIFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01998 528 PANTHER SODIUM/CALCIUM EXCHANGER 12 238 - -
Vian3g01998 528 Pfam Sodium/calcium exchanger protein 357 520 IPR004837 GO:0016020|GO:0055085
Vian3g01998 528 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016020|GO:0055085
Vian3g01998 528 Gene3D - 311 522 IPR044880 -
Vian3g01998 528 Gene3D - 86 220 IPR044880 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01998 5 528 Antiporters AT2G47600 71.321 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01998 K03452 - gmx:100792839 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01998 3 24667767 24672570 Vian3g01998 3 24667767 24672570 ECH