Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01965 ATGGCGACAATTAAACTTCATGGAAGCCCCTTCTCAACAGCCACCATGCGAGCTACTGCTTCCCTGTACGAGAAGGAGGTTGAATTTGAGTTTGTTCACGTTGACATGAAAAATGGTGAACACAAAAAGGAACCCTTCATTTTGCTCAACCTAATTTTCAATTCTGCTATTCACCTCCATCTGATGCAGCCATTTGGGCAAGTTCCAGCGTTCGAAGATGGAGATTTGAAGCTCTTTGAATCAAGGGCAATAACTCAATATATTGTTCATGAGTATGCTGATAAGGGGACCCAACTGATATGCAACGACTCGAAGAAGATGGCAATAGTGAGAATGTGGATGGAAATAGAGAGCCAAAAGTACGATCAAGCAGCTTCAAAACTTGTATGGGAGGTTGCAGTAAAGCCTATGTATGGGATTCCTACGGATCTGGCGGCTGTAGAAGAGACAGAAGGGAAACTAGGTACTATTCTTGATTTCTACGAGAAAACACTGTCTCAAAACAAATACTTAGCAGGTGAGTGTTTCACCTTGGCGGATCTGCATCACCTTCCCACCCTTCATTACTTGATGAACACACCGAGCAAGAAGTTGTTTGAATCACGACCACATGTTACTGCATGGATTGCTGATATTACAGCAAGACCAGCTTGGTCTAAGGTTCTTGCCATGCAGCCCAATCTAAGCAGTAAATAG 696 0.4325 MATIKLHGSPFSTATMRATASLYEKEVEFEFVHVDMKNGEHKKEPFILLNLIFNSAIHLHLMQPFGQVPAFEDGDLKLFESRAITQYIVHEYADKGTQLICNDSKKMAIVRMWMEIESQKYDQAASKLVWEVAVKPMYGIPTDLAAVEETEGKLGTILDFYEKTLSQNKYLAGECFTLADLHHLPTLHYLMNTPSKKLFESRPHVTAWIADITARPAWSKVLAMQPNLSSK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01965 231 SFLD Main (cytGST) 1 225 - -
Vian3g01965 231 Pfam Glutathione S-transferase, N-terminal domain 3 89 IPR004045 -
Vian3g01965 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 96 IPR004045 -
Vian3g01965 231 SUPERFAMILY GST C-terminal domain-like 98 221 IPR036282 -
Vian3g01965 231 FunFam Glutathione S-transferase F2 102 222 - -
Vian3g01965 231 Gene3D Glutaredoxin 1 100 - -
Vian3g01965 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 103 231 IPR010987 -
Vian3g01965 231 CDD GST_C_Phi 105 222 IPR034347 -
Vian3g01965 231 Gene3D - 102 227 - -
Vian3g01965 231 Pfam Glutathione S-transferase, C-terminal domain 125 216 IPR004046 -
Vian3g01965 231 SUPERFAMILY Thioredoxin-like 1 96 IPR036249 -
Vian3g01965 231 SFLD Main.5: Phi-like 1 225 - -
Vian3g01965 231 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01965 Vian-Chr3 23757573 23758673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01965 1 222 Glutathione S-transferase Gene Family AT1G02930 57.658 1.46e-91 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01965 K00799 - gmx:100799868 373.629