Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01959 ATGGCATCCATTATAGCTTCTCAAGCCATGATCTCCGGGACTTTCTCCATCATCCAACAATCCCTCTCACTTGGATGTTTCCCTCGCGTGAAAATAGTTCATACATCAGCCAAGTACGAAGGACAAGTTTACATCCCCGAAATCAATTTCATTCTTATGATTGCATGCGTTGCAGTCACAGCCGGATTCAAAAGCACCACAAAAATAGGCAATGCTTATGGGATAGCTGTGGTGTTCGTAATGACACTTACATCTGCTTTGGTGGTGTTAATCATGATCATGATATGGAAGACTCAAATACTTTTGGTTATCAGTTACGTGCTTATCATTGGTTCTGTTGAGCTTATCTATTTAAGCTCTGTGCTATATAAATTCAGAGAAGGAGGGTATCTTCCTCTTGCATTTGCTGCGGTGCTAATGAGCATCATGTGCATTTGGCATGACGTGTACAGGAGGAAGTACTATTACGAATTGGATCATAAGATTTCTCCAGAGAAGCTTAAGGGGATTACTAGTGGAAAAAACTTAGCTCGAATGCATGGACTTGCCATATTTTATTCTGAACTTGTTCAAGGCATTCCACCAATTTTCGAACATTATGTTACAAACATTCCTGCAATACACTCTGTGGTTGTGTTTGTGTCGATCAAATCATTGCCTGTTAGCAAAGTTGCTGCAGAAGAGCGGTTTCTGTTTAGGCAAGTGGAACATGAAGAACTCAGTGTGTTTCGATGTGTGGCCAGATACGGATACACTGATGTGCAGAACGAGGAAGAGGCTTTTGAGAATTTGTTGGTTAAGAGGCTGAAGGAATTTATAGGTGGTGGATTTTTGGCATCCGAAAGAGTTGTACTTGAAGATAAAACTGAAGAAATAGTGAATAGTGGTGAGTTTGAAGGTGTTGAAAAAGAGGTGGAAGCCATTGAAAAAGCAGTGCGAGGAGGTGTTGTTCATTTGATTGGTGAGAGTGAGGTGGTTGCTAGCAAAGGAGCCAGCATAAGGAAAAGGATTCTGATAAACTATGCTTACAATTTCTTGAAAAAGAACTTGAGGCAAAGTGATAAACTATTTGATATTCCTCACAAGCATATGGTCAAAGTGGGCATGACTTATGAACTTTGA 1122 0.4037 MASIIASQAMISGTFSIIQQSLSLGCFPRVKIVHTSAKYEGQVYIPEINFILMIACVAVTAGFKSTTKIGNAYGIAVVFVMTLTSALVVLIMIMIWKTQILLVISYVLIIGSVELIYLSSVLYKFREGGYLPLAFAAVLMSIMCIWHDVYRRKYYYELDHKISPEKLKGITSGKNLARMHGLAIFYSELVQGIPPIFEHYVTNIPAIHSVVVFVSIKSLPVSKVAAEERFLFRQVEHEELSVFRCVARYGYTDVQNEEEAFENLLVKRLKEFIGGGFLASERVVLEDKTEEIVNSGEFEGVEKEVEAIEKAVRGGVVHLIGESEVVASKGASIRKRILINYAYNFLKKNLRQSDKLFDIPHKHMVKVGMTYEL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01959 373 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 372 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian3g01959 373 Pfam K+ potassium transporter 1 253 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01959 Vian-Chr3 23578713 23579913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01959 2 373 Inorganic Solute Cotransporters AT4G13420 49.140 4.06e-132 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01959 K03549 - qsu:112006945 536.569