Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01931 ATGTGCACCTCAGATTTCAAATCTATAGAGTTCCATGGTTCAATAAGAGCTCTAACAGAGATAGAAGCTAGAGTGGGGATTAGGATTTTTGCCGAAGAACTCGACCGCTTCGAAGCCGCGAAGAAAGTGATTCTTGTCGACACATCCCTCTCTGACGAGCCTTCACGCCAATCCACTTCTCTCTTCAACCCTCCTAACAATCCCGCTGAGTACTTTTCCACGGTTGATGAGATCATCCATTGGATTGAGCATTTTTCGATCACACCACCCTCCTCCGCCGTGGGACGCATAGGGCCCGCCATTGTGGACCGGGAAGAGAATGCAATTCAACTTGCGATGTCGCGACCGGAGGACAAGATGCGGCACGTGCTGATTTGCAACATGATCCCACTTGACGCCGTGAGCCGCTACGGTTTGATAAGGAGGGTTTCGCTCTCGTTCTACTCGCACGACGGCGCCATCGACGATACCCTAAAGAGCTTCAGTGAGATCGGCTCGAGTCGCTTCCACGAGCGAGACGCTCTGGATGAGTGTTTAGTCATTCTGGGTGTTGAGCGGCTGAGTATTGAAGAGGTTCAAAGGGAGAGAAGCATGATTGACTCAGTGTCGGGCGCAGTTTAG 621 0.5153 MCTSDFKSIEFHGSIRALTEIEARVGIRIFAEELDRFEAAKKVILVDTSLSDEPSRQSTSLFNPPNNPAEYFSTVDEIIHWIEHFSITPPSSAVGRIGPAIVDREENAIQLAMSRPEDKMRHVLICNMIPLDAVSRYGLIRRVSLSFYSHDGAIDDTLKSFSEIGSSRFHERDALDECLVILGVERLSIEEVQRERSMIDSVSGAV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01931 206 SUPERFAMILY Cullin repeat-like 56 194 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01931 Vian-Chr3 22898994 22900122 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01931 58 194 EXO70 exocyst subunit family AT5G50380 35.602 6.53e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01931 K07195 - gmx:100809716 232.261