Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01930 ATGACTGGCACTGATGAAGTCAACCTCAGTGAATCTAAGAGTGTTGTTCCACTCAATACTTGGGTGCTTATCTCCAATTTCAAGCTTGCTTACAATCTACTAAGACGTTCTGATGGAACGTTCAATCGAGAGTTGGCGGAATTCCTCGACCGCAAGGTCCCGGCCAACGCAATTCCTGTTGATGGGGTATTCTCTTTTGATCATGTTGATAGAAACACCGGTCTATTCAATAGGGTGTATCAAGTAGCTCCTCAAAAGGAGACTAGGTGCAACATAATAGAGCTGGAGAAGCCCCTGAGCACCACAGAGATCATTCCTGTTATAATTTTCTTCCATGGTGGAAGCTTCTCTCATTCATCTGCTAACAGTGCTATCTATGACACTTTCTGCCGCCGCCTTGTGAGCCTTTGCAAGGCTGTGGTGGTTTCTGTAAACTACAGGCGATCGCCAGAGCACCGTTATCCATGTGCCTATGATGATGGCTGGGCAGCCCTCAAGTGGGTTAAGTCCAGGAAGTGGCTTCAGTGTGGAAAGGATTCCAAGGTTCATGTGTACTTGGCGGGCGATAGTTCTGGTGGTAACATTGCTCATCATGTGGCTGTGAGAGCTGCTGAAGAAGATATTGAAGTGCTAGGCAATATTCTTCTCCACCCACTGTTTGGTGGGGAGAAGCGAACTGAGTCAGAGAAGAAACTGGATGGAAAGTACTTTGTGAGGCTGCAAGACCGTGATTGGTATTGGAGAGCTTTTCTTCCAGAAGGAGCAGATAGAGATCATCCAGCTTGTAACCCCTTTGGTCCCAAGGGTAAAAATCTTGCAGGTCTCAAGTTGCCCAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTGAAGAATTGTGACCAAGATGTCAAACTTCTTTACCTTAAGGAGGCAACTATCGGTTTCTACTTCTTGCCAAATAATGATCATTTCTATATCCTCATGGAGGAGATAAAGAACTTCGTCAATTCTAACTGTTAA 1035 0.4522 MTGTDEVNLSESKSVVPLNTWVLISNFKLAYNLLRRSDGTFNRELAEFLDRKVPANAIPVDGVFSFDHVDRNTGLFNRVYQVAPQKETRCNIIELEKPLSTTEIIPVIIFFHGGSFSHSSANSAIYDTFCRRLVSLCKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRKWLQCGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGADRDHPACNPFGPKGKNLAGLKLPKSLVCVAGLDLLQDWQLEYVEGLKNCDQDVKLLYLKEATIGFYFLPNNDHFYILMEEIKNFVNSNC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01930 344 SUPERFAMILY alpha/beta-Hydrolases 100 341 IPR029058 -
Vian3g01930 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Vian3g01930 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Vian3g01930 344 PANTHER ARYLACETAMIDE DEACETYLASE 36 315 - -
Vian3g01930 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Vian3g01930 344 FunFam Gibberellin receptor GID1 1 342 - -
Vian3g01930 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01930 Vian-Chr3 22883917 22885627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01930 1 342 Carbohydrate Esterase AT3G63010 75.219 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01930 K14493 - gmx:100804463 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01930 3 22883917 22885627 Vian3g01930 3 22883917 22885627 ECH
Vian2g02051 2 40243144 40244578 Vian3g01930 3 22883917 22885627 ECH
Vian2g02051 2 40243144 40244578 Vian3g01930 3 22883917 22885627 PCT