Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01864 ATGGGTAGTGTAGATCACGAGTACCCTCTGGAAGCTGAGAGCGTGCAGCAGCAGCAGCATCATCATCAGCAGCAGCAAGTAGAGGTTCCTCCACCTCAACCCTTTTTCAAGTCTCTGAAGATCTCCTTGAAGGAGACTTTCTTCCCAGACGACCCTTTGAGACAGTTCAAAAACAAGCCACCCTCCAAAAAGATCATGCTTGCTATTCAGTATTTCTTCCCCATCTTCCAATGGGCACCCAAATACACCTTCAACTTCTTCAAAGCTGACCTCATAGCTGGCATCACCATAGCTAGCTTGGCCATTCCTCAAGGCATCAGCTATGCCAAGCTCGCCAACCTCCCTCCTATCCTCGGACTATATTCAAGCTTTATACCACCTTTGATTTATGCCATGATGGGAAGCTCAAGGGATTTGGCGGTGGGCACGGTGGCGGTTGGATCGCTTCTGATGGGTTCCATGTTGAGTGATGTGGTTAATCCCAACGAAGACCCACAGCTTTACCTACACCTTGCCTTCACTGCTACATTATTTGCTGGAATTTTTGAGGCTGCTTTGGGTTTGTTTAGCAAAAAACGACCAAGGTTTTTCTGGGTGTCAGCAATGGCGCCGTTAACATCGGTTATATTGGGAAGTCTGTTTGTTTATTTCACTCATGCTGAGAGGAACGGAGTTGAAGTGATAGGAGAATTGAAGAAGGGTTTAAATCCACCATCGGTATCAAAGCTGGTTTTTGTGTCACCTTATATGACCACAGCTGTGAAAACTGGCATTGTTGTTGGCATCATATCACTAGCAGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTATAAAAATTACAATATTGATGGCAATAAAGAGATGATAGCTATGGGTACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACATCACAACAGGGCCATTTTCACGCTCAGCCGTCAACTATAACGCTGGATGCAAAACAGCAGCTTCCAACATTATAATGTCAATAGCAGTGATGTTGACATTGCTATTCCTAACACCCTTGTTCCATTACACTCCCCTGGTGGTGCTGTCAGCCATTATTGTATCTGCAATGCTTGGCCTCATAGATTATGAAGCAGCCATCCATCTCTGGAAGATTGATAAATTTGACTTTGTTGTGTGCATGAGTGCATACATTGGCGTGGTCTTTGCCAGTGTTGAAATTGGCTTAGTCATAGCTGTTGCAATTTCTCTACTTAGGGTACTGCTTTTCATTGCAAGGCCAAGGACATTCGTTTTGGGAAACCTTCCAAATTCTGGGATTTACAGAAATGTTGAGCACTATCCAAATGCAAAACATGTTCCTGGAATCCTCATCCTAGCCATTGATGCACCGATTTACTTTGCCAATGCAGGCTATTTAAGAGAAAGGATCACAAGGTGGGTTGATGAAGAAGAAAGCAGAATCAAAGCTACTGAAGAGACAAGTTTGCAGTATGTTATAATGGATATGAGTGGTGTTGGAAACATTGATACAAGTGGAATAAGTATGCTTGAAGAAGTCAAGAAGAATACTGAGAGAAGAGAACTTCAACTTGTTTTGGTGAATCCGGGAAGCGAGGTGATGAAGAAACTGAACAAATCCAAGTTCCAAAATCATTTAGGAGAGAGATGGATCTATTTAACTGTTGAAGAGGCCGTTGGAGCATGCAACTTCAATCTCCATTCAAGAACGAATATGAAGAACGATGAATCAGAGGGTTGGAACAATGTTTGA 1749 0.4311 MGSVDHEYPLEAESVQQQQHHHQQQQVEVPPPQPFFKSLKISLKETFFPDDPLRQFKNKPPSKKIMLAIQYFFPIFQWAPKYTFNFFKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSDVVNPNEDPQLYLHLAFTATLFAGIFEAALGLFSKKRPRFFWVSAMAPLTSVILGSLFVYFTHAERNGVEVIGELKKGLNPPSVSKLVFVSPYMTTAVKTGIVVGIISLAEGIAVGRSFAMYKNYNIDGNKEMIAMGTMNIVGSFTSCYITTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFVVCMSAYIGVVFASVEIGLVIAVAISLLRVLLFIARPRTFVLGNLPNSGIYRNVEHYPNAKHVPGILILAIDAPIYFANAGYLRERITRWVDEEESRIKATEETSLQYVIMDMSGVGNIDTSGISMLEEVKKNTERRELQLVLVNPGSEVMKKLNKSKFQNHLGERWIYLTVEEAVGACNFNLHSRTNMKNDESEGWNNV 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01864 582 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Vian3g01864 582 Gene3D STAS domain 418 564 IPR036513 -
Vian3g01864 582 PANTHER SULFATE TRANSPORTER 192 571 IPR001902 GO:0016020|GO:0055085
Vian3g01864 582 SUPERFAMILY SpoIIaa-like 440 561 IPR036513 -
Vian3g01864 582 Pfam STAS domain 439 557 IPR002645 -
Vian3g01864 582 CDD STAS_SulP_like_sulfate_transporter 439 554 - -
Vian3g01864 582 ProSiteProfiles STAS domain profile. 438 561 IPR002645 -
Vian3g01864 582 Pfam Sulfate permease family 192 387 IPR011547 GO:0016020
Vian3g01864 582 Pfam Sulfate permease family 87 189 IPR011547 GO:0016020
Vian3g01864 582 FunFam Sulfate transporter 31 418 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01864 Vian-Chr3 21595249 21601070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01864 181 567 Inorganic Solute Cotransporters AT4G02700 66.150 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01864 K17471 - gmx:100810196 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01864 3 21595249 21601070 Vian3g01864 3 21595249 21601070 ECH