Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01849 ATGCTGCAAATTCTTTATATCTATCATATCCAAACTGGAACTGGAGAAGAAGACCTAACATTCCAAGATAATCTCATCCAACTCATCAATGTCATACCGAGACAGGAGACGGCGACAGCAGTGCCGGCGAAGGCCAGGACGACGTCAGGAGTCGAACCGTCGCCTGTGGCGGTTTCGTTTTCGAAGCTCTTCGCATGTGCTGACCGCTTCGATTGGTTCCTCATGACCGTCGGCTCCCTTGCTGCCGTGGCTCATGGCACCGCGCTCATCATTTACTTGCACTATTTCGCGAAGATCATCCACGTGCTGCGAATGGATCTTAAACTCGGCATGTCACACGAGCAGTTTAACAGGTTCACCGAGAAAGAAAGAAGAGCTTGGGATGGCAATACCTTCTATGACCACACGCTTTCTCCAAAACTCTTTGATGATTCGTGTGTAATTGGTAGAGCTCTCTGTTTACTCCCTTAG 471 0.4904 MLQILYIYHIQTGTGEEDLTFQDNLIQLINVIPRQETATAVPAKARTTSGVEPSPVAVSFSKLFACADRFDWFLMTVGSLAAVAHGTALIIYLHYFAKIIHVLRMDLKLGMSHEQFNRFTEKERRAWDGNTFYDHTLSPKLFDDSCVIGRALCLLP 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01849 156 Gene3D ABC transporter type 1, transmembrane domain 56 139 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01849 Vian-Chr3 21297514 21299192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01849 57 101 Calmodulin-binding Proteins AT2G36910 40.000 3.17e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01849 K05658 - gmx:100779000 117.087