Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01843 ATGACGACTGGTATAGTACGAGACCAGAACCTGGAGAAACACATTCACAAGCAGATGGGGTGCATGGCTGGCTTTCTTCAGATCTTTGACCGTCATCAGATACTCACTGGAAAACGCATCTATTCCCCCAAACGTCTACCTCCGGCCTCACCGGAACCTGACAAAGTTACTGCCTCGCCGGCTCGTTCCATGCAGTCGCCGGCTAGGGAGGTGGTCCAATCCGAACCCAAGGCGAGTTCTCCTGCGCTCCCTGTTCTGGAATTCAAGGAAGGCACGCGTTCCTCTTGGAAGTTCTCGCGAGAGGCTCCGAGACTGTCTCTTGACAGCAGAGCCATGGTGGACGCAAAAGGAACTCTTCACCTTCACACGCGAGAGATCCCCTCGGAGAATGATGGAGACAAGCAGCGTCGTTCCACCAGCGTCATTGCCAAGCTTATGGGCCTGGAGCCCCTGCCCGATTCAGAGCCCGGACCAGGGCCCATAGCAAAGCTGCAGAGATCCGCTTCGGAGTCCAGAGTGTCCAGAGATCTGTCTCTGCCTCTGCCACTGCCACAGTGTCGTTTTCTGGACACAAACAATTTCCCAAGCGCGGTTCAGGTCACCAATGTAGTCCTCGAGAATAATAATGCTGCCATCGATGCCCGATTGAGCAATGGCAGAGCTGCAGATCCACCCAGGCAAAGGGCCAAGAAGAGTTTCTACGACTCGGCGGATTTCTTCCCCGAGCCCAAACACACCGCTTCGGTGTACGGGGAGATTGAGAGGAGGTTGCGGATGCGAGGGATTAACGAGCCATCCAAGGATCTCCACACTCTCAAACACATCCTGGAGGCCTTGCAGCTCAAGGGGCTTTTGCATTCCAACGGCAAATCCAATCAATCTCCCATTGTCGTTATGAAACCTGTCCGATCGGTGAACCGGACCGGTAGCGATTCTCCTCCTCCCGCCCCTCTCCTCCGGTCCAGTCCTCGCCGGAGCCTCCGTGTTGGGAACGAGAACAGGAGGATTGACCAAAACGAGCGAGGTTCAATGAGTCAAAGCAACAGAGCACTAAGCTCGAGTCCAAACAGGAGAAAGCATCGAATCGTGGAACCTCAGAGGAAAGTGTGCGTTGATTCAAGAAGGGGGTCTGTGTCTGTCTCTCCGGTTCATTCTCCCAAGACGAGCCCAAGAAGGAATGCAGGCAATCAGCAGGTGCCATGTGGATCGCCTAGGATGAGAAGAAATGTGGAGCCTAAGTTGAAAATGCTGGGTGGGGCAGAGGATGAATCGTCCACAGTCTCAGAGAACAGCTTCAGCACCTCTTCATATCCCGATACAGAGAGGTACAGGTTGGAAGAGTACAAGGAAGGGAAAGATCTGCTGGATAGGTGTGATAAGCTGCTGAACAGCATAGCAGAAATAACAGCAGCCAACGAGTTGCAACCGAGTCCAGTATCGGTTCTGGACTCGTCGTTTGACAAGGACGACTGGTGTTCACCATCCCCTATAACCAAACGCTGCATTGATTACAAAGGAGGTCCAATGTCTAAGACCCTAGGGGAACTTAATGGAACAAAATATCTAACTACGGGAACAGTAGATGGTTTGTCCTCTCGCTCTCCCAAAATCCCAACCAATGTGGACCAATCATTTGATCCCAGGGATGTTGACATGGCATCACTCAGTTGGCTCAGTCACTTACCTCAAAACTGCACTGCGGTGCGGTGCGATCAAGCGGCGGAGTCAGAAGATGATATGTGGAGTGCGGCACTGTGCAGTAGCGAGGAGGCAGCGTCGGAGGATTGCGATTTCGTGTACGTATCGGAGATTCTTCGAGCGTGCAGTTACTTGCCGGAAGAGAGCGACATTTTTCTGTTACTGGAGAAGCAGCAATGCCTGAAAGGAAAGGATACCTCAAAGGCTTCGACGCTGCAGAGGCGGTTGATCTTCGACACTCTCCAGGAGATCCTGGAGCGGAACCAACAGTTGCCGCCGTGGAAGGCGGTGTCGTACGGCGAGCAGAGGCAGAAGATCTGGTCGGAGTTTCGGAGGATCCGAGAGAGGGAAGAATCGGAATCGGAGGACTTGTTCAAGGTTATATGCGGAGTGTTGAAGAAGGACATGGCGGAGGAAATGCGGGGGTGGGGAGAATGGGCGGTGGAGATGGGAGATGTGGTGTTAGACATTGAACGTCTGGTGTTCAAAGATCTGGTTGGCGAAACCATTAGAGAACTCGCTTCGTTTTCTCCTCATTGTAACAACGACAAGCTACCCGCGCTTCGTAGGAAACTCCTCTTTTGA 2283 0.5296 MTTGIVRDQNLEKHIHKQMGCMAGFLQIFDRHQILTGKRIYSPKRLPPASPEPDKVTASPARSMQSPAREVVQSEPKASSPALPVLEFKEGTRSSWKFSREAPRLSLDSRAMVDAKGTLHLHTREIPSENDGDKQRRSTSVIAKLMGLEPLPDSEPGPGPIAKLQRSASESRVSRDLSLPLPLPQCRFLDTNNFPSAVQVTNVVLENNNAAIDARLSNGRAADPPRQRAKKSFYDSADFFPEPKHTASVYGEIERRLRMRGINEPSKDLHTLKHILEALQLKGLLHSNGKSNQSPIVVMKPVRSVNRTGSDSPPPAPLLRSSPRRSLRVGNENRRIDQNERGSMSQSNRALSSSPNRRKHRIVEPQRKVCVDSRRGSVSVSPVHSPKTSPRRNAGNQQVPCGSPRMRRNVEPKLKMLGGAEDESSTVSENSFSTSSYPDTERYRLEEYKEGKDLLDRCDKLLNSIAEITAANELQPSPVSVLDSSFDKDDWCSPSPITKRCIDYKGGPMSKTLGELNGTKYLTTGTVDGLSSRSPKIPTNVDQSFDPRDVDMASLSWLSHLPQNCTAVRCDQAAESEDDMWSAALCSSEEAASEDCDFVYVSEILRACSYLPEESDIFLLLEKQQCLKGKDTSKASTLQRRLIFDTLQEILERNQQLPPWKAVSYGEQRQKIWSEFRRIREREESESEDLFKVICGVLKKDMAEEMRGWGEWAVEMGDVVLDIERLVFKDLVGETIRELASFSPHCNNDKLPALRRKLLF 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01843 760 MobiDBLite consensus disorder prediction 147 169 - -
Vian3g01843 760 MobiDBLite consensus disorder prediction 423 438 - -
Vian3g01843 760 MobiDBLite consensus disorder prediction 304 438 - -
Vian3g01843 760 MobiDBLite consensus disorder prediction 357 371 - -
Vian3g01843 760 MobiDBLite consensus disorder prediction 59 73 - -
Vian3g01843 760 MobiDBLite consensus disorder prediction 378 403 - -
Vian3g01843 760 PANTHER LONGIFOLIA PROTEIN 3 64 IPR033334 GO:0051513
Vian3g01843 760 Pfam Domain of unknown function (DUF4378) 597 734 IPR025486 -
Vian3g01843 760 MobiDBLite consensus disorder prediction 41 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01843 Vian-Chr3 21204937 21207873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01843 571 760 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 47.917 4.25e-47 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01843 - - gmx:100814119 1019.99