Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01823 ATGGCCAATCACCCTTCCGAACCTCCCACCGACGACTTCCTCGACGAAATCCTCGGCCTCCCCACCTTCGCCTCCGCCGACCACGCCGACGCTTCTCCGATGATGCTCCAACTCAACTCCGGGGACGCCGCCTTCCACGCGCCGCCATACCAGCTGGGCCTCAGCTTGGAACAAGGTAAGGGAGGCTTCCTCTCGCCCGAAGATGCTTCTGGTAGCGGCAACCGCTTCCGCGACGACGTCGTTGGTACCAGGCCTAAGAACGTGTGCTTGAAATCTAGAGTTTTTGAAGTATTAAACTATACTGTATTTCGTATAGAGACAGATAGAGCTGCCATGCTGGACGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTAAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCTGTAGCACCACTAGTAACCGATATCCCATTATCATCGGTAGAGGAAGAAGGCAGTGAAGGAAGAAACCAGCCTGCTTGGGAGAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGGGCTGCCATGCAGTTTCTTCAATCAAAAGCACTCTGCATCATGCCTATCTCACTGGCATCAGCAATATACCCGTCACAACCATCGGATCCTTCTAGTATAGTTAAACCTGAAACTAATCCACCTTCATAG 690 0.5043 MANHPSEPPTDDFLDEILGLPTFASADHADASPMMLQLNSGDAAFHAPPYQLGLSLEQGKGGFLSPEDASGSGNRFRDDVVGTRPKNVCLKSRVFEVLNYTVFRIETDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYPSQPSDPSSIVKPETNPPS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01823 229 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 106 208 - -
Vian3g01823 229 CDD bHLH_AtbHLH_like 107 131 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01823 Vian-Chr3 20953731 20957437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01823 45 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 57.384 5.18e-75 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01823 - - gmx:100793177 351.288