Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01807 ATGGCGATTTTGCAGGGCCTTCAGACATTTCTGCTCTCACAAACCTTCATCACTATCACTTTTCCATTCGCGCTAGGCAAACTCCAAAGCAATTATTCTCTTCGCTTCTATTCTCATTCCGATCTCTCTTGCACGTTCAAAACCACAGCTCCCTCGCGTTCAACTTTGATCCATGATTTCTCTTCCACGCCGTTGGAAAATGTCCGCACGTGTTTTTCTTGGCCGGGGATTCCGGAAAATATTGTTGTTGGTTCTCATGTTTGGGTTGGAGATCCAGAAGTAATTTGGATTGCTGGCCAGGTACTGAGTATCAATGGAGAAGATGCTGAAATTCAGATTAGTGATGAGAGGAAGGTTGTTTCCCATTTGTCAAAATTATATCCAAAGGATATCGATGCACCAGCTGATGGAGTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGCTGTGCTGCATAATTTGGAAACTAGATATGCGATGAATGAAATATATGAAAAGGAGAAATATAAGTTGGGAGATCCTAAATCATTTCACTACCTTAACCAATCCAATTGCTACGAATTAGTTGGTGTTAATGCTGCTCAAGAATATCTTAGCACCAAGAGAGCCATGGATATTGTGGGAATCAGTCAGGACGAGCAGGATGCTATTTTCAGAGTTGTAGCTGGTATTCTTCATCTTGGAAATATTAACTTTTCAAAATCAGAAGAAACTGATTTTGCAGTTCTAGAAGAAGAAGAATCCAAGTTTCATCTACAAACAACAGCAGAACTTCTTATGTATTGCTGA 795 0.4038 MAILQGLQTFLLSQTFITITFPFALGKLQSNYSLRFYSHSDLSCTFKTTAPSRSTLIHDFSSTPLENVRTCFSWPGIPENIVVGSHVWVGDPEVIWIAGQVLSINGEDAEIQISDERKVVSHLSKLYPKDIDAPADGVDDMTKLAYLHEPAVLHNLETRYAMNEIYEKEKYKLGDPKSFHYLNQSNCYELVGVNAAQEYLSTKRAMDIVGISQDEQDAIFRVVAGILHLGNINFSKSEETDFAVLEEEESKFHLQTTAELLMYC 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01807 264 Gene3D Myosin VI head, motor domain, U50 subdomain 210 263 - -
Vian3g01807 264 Pfam Myosin head (motor domain) 167 261 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian3g01807 264 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 82 131 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vian3g01807 264 ProSiteProfiles Myosin motor domain profile. 161 264 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian3g01807 264 PANTHER MYOSIN 130 167 - -
Vian3g01807 264 Pfam Myosin N-terminal SH3-like domain 84 120 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vian3g01807 264 Gene3D Kinesin motor domain 105 163 IPR036961 -
Vian3g01807 264 Gene3D - 164 206 - -
Vian3g01807 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 261 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01807 Vian-Chr3 20635339 20647733 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01807 167 261 Myosins gene family AT5G20490 68.421 5.97e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01807 K10357 - var:108318741 192.586